Efficient mapping of Applied Biosystems SOLiD sequence data to a reference genome for functional genomic applications. - Brian D. Ondov; Anjana Varadarajan; Karla D. Passalacqua; Nicholas H. Bergman (Bioinform., 2008)

Bacillus anthracis genome organization in light of whole transcriptome sequencing. - Jeffrey Martin; Wenhan Zhu; Karla D. Passalacqua; Nicholas H. Bergman; Mark Borodovsky (BMC Bioinform., 2010)