Friendly Neighbors Method for Unsupervised Determination of Gene Significance in Time-course Microarray Data. - Karuturi R. Krishna Murthy; Vinsensius B. Vega (BIBE, 2004)

Improved Fourier Transform Method for Unsupervised Cell-Cycle Regulated Gene Prediction. - Karuturi R. Krishna Murthy; Liu Jian Hua (CSB, 2004)

ConstrainedMotif: A Periodicity Constraint Based Algorithm to Predict Cell-Cycle Associated Promoter Motifs Using Time-Course Gene Expression Data. - Yingren Liu; Karuturi R. Krishna Murthy; Wing-Kin Sung (BIBE, 2005)

Bias in the estimation of false discovery rate in microarray studies. - Yudi Pawitan; Karuturi R. Krishna Murthy; Stefan Michiels; Alexander Ploner (Bioinform., 2005)

Differential Friendly Neighbors Algorithm for Differential Relationships Based Gene Selection and Classification using Microarray Data. - Karuturi R. Krishna Murthy; Silvia Wong; Wing-Kin Sung; Lance D. Miller (DMIN, 2006)

Significance Analysis and Improved Discovery of Differentially Co-expressed Gene Sets in Microarray Data. - Haixia Li; Karuturi R. Krishna Murthy (ICDM Workshops, 2006)

Data-Driven Smoothness Enhanced Variance Ratio Test to Unearth Responsive Genes in 0-Time Normalized Time-Course Microarray Data. - Juntao Li; Jianhua Liu; Karuturi R. Krishna Murthy (ISBRA, 2007)

Near-sigmoid Modeling to Simultaneously Profile Genome-wide DNA Replication Timing and Efficiency in Single DNA Replication Microarray Studies. - Juntao Li; Majid Eshaghi; Jianhua Liu; Karuturi R. Krishna Murthy (APBC, 2008)

Stepped Linear Regression to Accurately Assess Statistical Significance in Batch Confounded Differential Expression Analysis. - Juntao Li; Jianhua Liu; Karuturi R. Krishna Murthy (ISBRA, 2008)

Weighted Top Score Pair Method for Gene Selection and Classification. - Huaien Luo; Yuliansa Sudibyo; Lance D. Miller; Karuturi R. Krishna Murthy (PRIB, 2008)

Modeling and Visualizing Heterogeneity of Spatial Patterns of Protein-DNA Interaction from High-Density Chromatin Precipitation Mapping Data. - Juntao Li; Fajrian Yunus; Zhu Lei; Majid Eshaghi; Jianhua Liu; Karuturi R. Krishna Murthy (ISBRA, 2009)

Deciphering Transcription Factor Binding Patterns from Genome-Wide High Density ChIP-chip Tiling Array Data. - Juntao Li; Lei Zhu; Majid Eshaghi; Jianhua Liu; Karuturi R. Krishna Murthy (ISBRA, 2010)

Differential co-expression framework to quantify goodness of biclusters and compare biclustering algorithms. - Burton Chia; R. Krishna Murthy Karuturi (Algorithms Mol. Biol., 2010)

Genome-wide estimation of firing efficiencies of origins of DNA replication from time-course copy number variation data. - Huaien Luo; Juntao Li; Majid Eshaghi; Jianhua Liu; R. Krishna Murthy Karuturi (BMC Bioinform., 2010)

Significance analysis and improved discovery of disease-specific Differentially Co-expressed Gene Sets in microarray data. - Haixia Li; R. Krishna Murthy Karuturi (Int. J. Data Min. Bioinform., 2010)

Iterative Piecewise Linear Regression to Accurately Assess Statistical Significance in Batch Confounded Differential Expression Analysis. - Juntao Li; Kwok Pui Choi; R. Krishna Murthy Karuturi (ISBRA, 2012)

A computational method to aid in the design and analysis of single cell RNA-seq experiments. - Douglas Abrams; Parveen Kumar; R. Krishna Murthy Karuturi; Joshy George (ICCABS, 2017)

MultiDCoX: Multi-factor analysis of differential co-expression. - Herty Liany; Jagath C. Rajapakse; R. Krishna Murthy Karuturi (BMC Bioinform., 2017)

A computational method to aid the design and analysis of single cell RNA-seq experiments for cell type identification. - Douglas Abrams; Parveen Kumar; R. Krishna Murthy Karuturi; Joshy George (BMC Bioinform., 2019)

Transcriptome Analysis. - Anuj Srivastava; Joshy George; R. Krishna Murthy Karuturi (Encyclopedia of Bioinformatics and Computational Biology (3), 2019)