Linking Changes in Epithelial Morphogenesis to Cancer Mutations Using Computational Modeling. - Katarzyna A. Rejniak; Shizhen E. Wang; Nicole S. Bryce; Hang Chang; Bahram Parvin; Jerome Jourquin; Lourdes Estrada; Joe W. Gray; Carlos L. Arteaga; Alissa M. Weaver; Vito Quaranta; Alexander R. A. Anderson (PLoS Comput. Biol., 2010)

IBCell Morphocharts: A Computational Model for Linking Cell Molecular Activity with Emerging Tissue Morphology. - Katarzyna A. Rejniak (Discrete and Topological Models in Molecular Biology, 2014)

Morphophenotypic classification of tumor organoids as an indicator of drug exposure and penetration potential. - Aleksandra Karolak; Sharan Poonja; Katarzyna A. Rejniak (PLoS Comput. Biol., 2019)

Collective Cell Migration in a Fibrous Environment: A Hybrid Multiscale Modelling Approach. - Szabolcs Suveges; Ibrahim Chamseddine; Katarzyna A. Rejniak; Raluca Eftimie; Dumitru Trucu (Frontiers Appl. Math. Stat., 2021)

Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations. - Jessica L. Kingsley; James R. Costello; Natarajan Raghunand; Katarzyna A. Rejniak (PLoS Comput. Biol., 2021)

LinG3D: visualizing the spatio-temporal dynamics of clonal evolution. - Anjun Hu; Awino M. E. Ojwang'; Kayode D. Olumoyin; Katarzyna A. Rejniak (BMC Bioinform., 2024)