PHACTS, a computational approach to classifying the lifestyle of phages. - Katelyn McNair; Barbara A. Bailey; Robert A. Edwards (Bioinform., 2012)

PARTIE: a partition engine to separate metagenomic and amplicon projects in the Sequence Read Archive. - Pedro J. Torres; Robert A. Edwards; Katelyn McNair (Bioinform., 2017)

PHANOTATE: a novel approach to gene identification in phage genomes. - Katelyn McNair; Carol Zhou; Elizabeth A. Dinsdale; Brian Souza; Robert A. Edwards (Bioinform., 2019)

multiPhATE: bioinformatics pipeline for functional annotation of phage isolates. - Carol L. Ecale Zhou; Stephanie Malfatti; Jeffrey A. Kimbrel; Casandra Philipson; Katelyn McNair; Theron Hamilton; Robert A. Edwards; Brian Souza (Bioinform., 2019)

PRFect: a tool to predict programmed ribosomal frameshifts in prokaryotic and viral genomes. - Katelyn McNair; Peter Salamon; Robert A. Edwards; Anca M. Segall (BMC Bioinform., 2024)