High Precision Simulation of Near Earth Satellite Orbits for SAR-Applications. - Marc Kalkuhl; Katharina Nöh; Otmar Loffeld; Wolfgang Wiechert (International Conference on Computational Science, 2004)

Parallel Solution of Cascaded ODE Systems Applied to 13C-Labeling Experiments. - Katharina Nöh; Wolfgang Wiechert (International Conference on Computational Science, 2004)

The topology of metabolic isotope labeling networks. - Michael Weitzel; Wolfgang Wiechert; Katharina Nöh (BMC Bioinform., 2007)

13C labeling experiments at metabolic nonstationary conditions: An exploratory study. - Sebastian Aljoscha Wahl; Katharina Nöh; Wolfgang Wiechert (BMC Bioinform., 2008)

Customizable Visualization on Demand for Hierarchically Organized Information in Biochemical Networks. - Peter Droste; Eric von Lieres; Wolfgang Wiechert; Katharina Nöh (CompIMAGE, 2010)

Metabolic Flux Analysis in the Cloud. - Tolga Dalman; Tim Dörnemann; Ernst Juhnke; Michael Weitzel; Matthew Smith 001; Wolfgang Wiechert; Katharina Nöh; Bernd Freisleben (eScience, 2010)

Workflows for Metabolic Flux Analysis: Data Integration and Human Interaction. - Tolga Dalman; Peter Droste; Michael Weitzel; Wolfgang Wiechert; Katharina Nöh (ISoLA (1), 2010)

An Online Provenance Service for Distributed Metabolic Flux Analysis Workflows. - Tolga Dalman; Michael Weitzel; Wolfgang Wiechert; Bernd Freisleben; Katharina Nöh (ECOWS, 2011)

Visualizing multi-omics data in metabolic networks with the software Omix - A case study. - Peter Droste; Stephan Miebach; Sebastian Niedenführ; Wolfgang Wiechert; Katharina Nöh (Biosyst., 2011)

Determination of flux directions by thermodynamic network analysis: Computing informative metabolite pools. - Frieder Hadlich; Katharina Nöh; Wolfgang Wiechert (Math. Comput. Simul., 2011)

Semi-automatic drawing of metabolic networks. - Peter Droste; Wolfgang Wiechert; Katharina Nöh (Inf. Vis., 2012)

A Software Framework for Modeling and Simulation of Dynamic Metabolic and Isotopic Systems. - Jana Tillack; Stephan Noack; Katharina Nöh; Atya Elsheikh; Wolfgang Wiechert (Simul. Notes Eur., 2012)

13CFLUX2 - high-performance software suite for 13C-metabolic flux analysis. - Michael Weitzel; Katharina Nöh; Tolga Dalman; Sebastian Niedenführ; Birgit Stute; Wolfgang Wiechert (Bioinform., 2013)

Cloud MapReduce for Monte Carlo bootstrap applied to Metabolic Flux Analysis. - Tolga Dalman; Tim Dörnemann; Ernst Juhnke; Michael Weitzel; Wolfgang Wiechert; Katharina Nöh; Bernd Freisleben (Future Gener. Comput. Syst., 2013)

Vizardous: interactive analysis of microbial populations with single cell resolution. - Stefan Helfrich; Charaf E. Azzouzi; Christopher Probst; Johannes Seiffarth; Alexander Grünberger; Wolfgang Wiechert; Dietrich Kohlheyer; Katharina Nöh (Bioinform., 2015)

Visual workflows for 13C-metabolic flux analysis. - Katharina Nöh; Peter Droste; Wolfgang Wiechert (Bioinform., 2015)

Fluxome study of Pseudomonas fluorescens reveals major reorganisation of carbon flux through central metabolic pathways in response to inactivation of the anti-sigma factor MucA. - Stina K. Lien; Sebastian Niedenführ; Håvard Sletta; Katharina Nöh; Per Bruheim (BMC Syst. Biol., 2015)

A Pareto approach to resolve the conflict between information gain and experimental costs: Multiple-criteria design of carbon labeling experiments. - Katharina Nöh; Sebastian Niedenführ; Martin Beyß; Wolfgang Wiechert (PLoS Comput. Biol., 2018)

When a single lineage is not enough: Uncertainty-Aware Tracking for spatio-temporal live-cell image analysis. - Axel Theorell; Johannes Seiffarth; Alexander Grünberger; Katharina Nöh (Bioinform., 2019)

mycelyso - high-throughput analysis of Streptomyces mycelium live cell imaging data. - Christian Carsten Sachs; Joachim Koepff; Wolfgang Wiechert; Alexander Grünberger; Katharina Nöh (BMC Bioinform., 2019)

Reversible jump MCMC for multi-model inference in Metabolic Flux Analysis. - Axel Theorell; Katharina Nöh (Bioinform., 2020)

Polar Space Based Shape Averaging for Star-shaped Biological Objects. - Karina Ruzaeva; Katharina Nöh; Benjamin Berkels (VCBM, 2021)

HOPS: high-performance library for (non-)uniform sampling of convex-constrained models. - Johann F. Jadebeck; Axel Theorell; Samuel Leweke; Katharina Nöh (Bioinform., 2021)

Automated Characterization of Catalytically Active Inclusion Body Production in Biotechnological Screening Systems. - Karina Ruzaeva; Kira Küsters; Wolfgang Wiechert; Benjamin Berkels; Marco Oldiges; Katharina Nöh (EMBC, 2022)

Cell tracking for live-cell microscopy using an activity-prioritized assignment strategy. - Karina Ruzaeva; Jan-Christopher Cohrs; Keitaro Kasahara; Dietrich Kohlheyer; Katharina Nöh; Benjamin Berkels (IPAS, 2022)

A Hybrid Multi-Object Segmentation Framework with Model-Based B-Splines for Microbial Single Cell Analysis. - Karina Ruzaeva; Katharina Nöh; Benjamin Berkels (ISBI, 2022)

PolyRound: polytope rounding for random sampling in metabolic networks. - Axel Theorell; Johann F. Jadebeck; Katharina Nöh; Jörg Stelling (Bioinform., 2022)

Practical sampling of constraint-based models: Optimized thinning boosts CHRR performance. - Johann F. Jadebeck; Wolfgang Wiechert; Katharina Nöh (PLoS Comput. Biol., 2023)

Tracking One-in-a-Million: Large-Scale Benchmark for Microbial Single-Cell Tracking with Experiment-Aware Robustness Metrics. - Johannes Seiffarth; Luisa Blöbaum; Richard D. Paul; Nils Friederich; Angelo Jovin Yamachui Sitcheu; Ralf Mikut; Hanno Scharr; Alexander Grünberger; Katharina Nöh (ECCV Workshops (16), 2024)

Robust Approximate Characterization of Single-Cell Heterogeneity in Microbial Growth. - Richard D. Paul; Johannes Seiffarth; Hanno Scharr; Katharina Nöh (ISBI, 2024)

Customizable and Interactive Visualizations for Investigating Spatio-Temporal Single-Cell Information. - Johannes Seiffarth; Luisa Blöbaum; Alexander Grünberger; Katharina Nöh (ISBI, 2024)

Automated Processing of Pipelines Managing Now- and Forecasting of Infectious Diseases. - M. Shahbaz Memon; Johann F. Jadebeck; Michael Osthege; Anna Wendler; David Kerkmann; Henrik Zunker; Wolfgang Wiechert; Katharina Nöh; Jens Henrik Göbbert; Björn Hagemeier; Morris Riedel; Martin J. Kühn (MIPRO, 2024)

Parameter-efficient Bayesian Neural Networks for Uncertainty-aware Depth Estimation. - Richard D. Paul; Alessio Quercia; Vincent Fortuin; Katharina Nöh; Hanno Scharr (CoRR, 2024)

EAP4EMSIG - Experiment Automation Pipeline for Event-Driven Microscopy to Smart Microfluidic Single-Cells Analysis. - Nils Friederich; Angelo Jovin Yamachui Sitcheu; Annika Nassal; Matthias Pesch; Erenus Yildiz; Maximilian Beichter; Lukas Scholtes; Bahar Akbaba; Thomas Lautenschlager; Oliver Neumann; Dietrich Kohlheyer; Hanno Scharr; et al. (CoRR, 2024)

ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud. - Johannes Seiffarth; Tim Scherr; Bastian Wollenhaupt; Oliver Neumann; Hanno Scharr; Dietrich Kohlheyer; Ralf Mikut; Katharina Nöh (SoftwareX, 2024)

How To Make Your Cell Tracker Say "I dunno!". - Richard D. Paul; Johannes Seiffarth; David Rügamer; Hanno Scharr; Katharina Nöh (CoRR, 2025)

PyUAT: Open-source Python framework for efficient and scalable cell tracking. - Johannes Seiffarth; Katharina Nöh (CoRR, 2025)

EAP4EMSIG - Enhancing Event-Driven Microscopy for Microfluidic Single-Cell Analysis. - Nils Friederich; Angelo Jovin Yamachui Sitcheu; Annika Nassal; Erenus Yildiz; Matthias Pesch; Maximilian Beichter; Lukas Scholtes; Bahar Akbaba; Thomas Lautenschlager; Oliver Neumann; Dietrich Kohlheyer; Hanno Scharr; et al. (CoRR, 2025)