Detection of significantly differentially methylated regions in targeted bisulfite sequencing data. - Katja Hebestreit; Martin Dugas; Hans-Ulrich Klein (Bioinform., 2013)

An evaluation of methods to test predefined genomic regions for differential methylation in bisulfite sequencing data. - Hans-Ulrich Klein; Katja Hebestreit (Briefings Bioinform., 2016)

A framework for integrating directed and undirected annotations to build explanatory models of cis-eQTL data. - David Lamparter 002; Rajat Bhatnagar; Katja Hebestreit; T. Grant Belgard; Alice Zhang; Victor Hanson-Smith (PLoS Comput. Biol., 2020)