Motif profile dynamics and transient species in a Boolean model of mutualistic ecological communities. - Colin Campbell; Katriona Shea; Suann Yang; Réka Albert (J. Complex Networks, 2016)

Quantifying the Value of Perfect Information in Emergency Vaccination Campaigns. - Naomi V. Bradbury; William J. M. Probert; Katriona Shea; Michael C. Runge; Christopher Fonnesbeck; Matt J. Keeling; Matthew J. Ferrari; Michael J. Tildesley (PLoS Comput. Biol., 2017)

Real-time decision-making during emergency disease outbreaks. - William J. M. Probert; Chris P. Jewell; Marleen Werkman; Christopher Fonnesbeck; Yoshitaka Goto; Michael C. Runge; Satoshi Sekiguchi; Katriona Shea; Matt J. Keeling; Matthew J. Ferrari; Michael J. Tildesley (PLoS Comput. Biol., 2018)

Logistical constraints lead to an intermediate optimum in outbreak response vaccination. - Yun Tao; Katriona Shea; Matthew J. Ferrari (PLoS Comput. Biol., 2018)

Synergistic interventions to control COVID-19: Mass testing and isolation mitigates reliance on distancing. - Emily Howerton; Matthew J. Ferrari; Ottar N. Bjørnstad; Tiffany L. Bogich; Rebecca K. Borchering; Chris P. Jewell; James D. Nichols; William J. M. Probert; Michael C. Runge; Michael J. Tildesley; Cécile Viboud; Katriona Shea (PLoS Comput. Biol., 2021)

Whole community invasions and the integration of novel ecosystems. - Colin Campbell; Laura Russo; Réka Albert; Angus Buckling; Katriona Shea (PLoS Comput. Biol., 2022)

Cattle transport network predicts endemic and epidemic foot-and-mouth disease risk on farms in Turkey. - José L. Herrera-Diestra; Michael J. Tildesley; Katriona Shea; Matthew J. Ferrari (PLoS Comput. Biol., 2022)