DBTSS as an integrative platform for transcriptome, epigenome and genome sequence variation data. - Ayako Suzuki; Hiroyuki Wakaguri; Riu Yamashita; Shin Kawano; Katsuya Tsuchihara; Sumio Sugano; Yutaka Suzuki; Kenta Nakai (Nucleic Acids Res., 2015)

DBTSS/DBKERO for integrated analysis of transcriptional regulation. - Ayako Suzuki; Shin Kawano; Toutai Mituyama; Mikita Suyama; Yae Kanai; Katsuhiko Shirahige; Hiroyuki Sasaki; Katsushi Tokunaga; Katsuya Tsuchihara; Sumio Sugano; Kenta Nakai; Yutaka Suzuki (Nucleic Acids Res., 2018)

SpatialKNifeY (SKNY): Extending from spatial domain to surrounding area to identify microenvironment features with single-cell spatial omics data. - Shunsuke A. Sakai; Ryosuke Nomura; Satoi Nagasawa; Sunggi Chi; Ayako Suzuki; Yutaka Suzuki; Mitsuho Imai; Yoshiaki Nakamura; Takayuki Yoshino; Shumpei Ishikawa; Katsuya Tsuchihara; Shun-Ichiro Kageyama; et al. (PLoS Comput. Biol., 2025)