Fuzzy Rule-Based Framework for Medical Record Validation. - Kaustubh Supekar; Anup Marwadi; Yugyung Lee; Deep Medhi (IDEAL, 2002)

A QoS Oriented Framework for Adaptive Management of Web Service Based Workflows. - Chintan Patel; Kaustubh Supekar; Yugyung Lee (DEXA, 2003)

OntoKhoj: a semantic web portal for ontology searching, ranking and classification. - Chintan Patel; Kaustubh Supekar; Yugyung Lee; E. K. Park (WIDM, 2003)

Ontology Based Metadata Management in Medical Domains. - Quddus Chong; Anup Marwadi; Kaustubh Supekar; Yugyung Lee (J. Res. Pract. Inf. Technol., 2003)

Characterizing Quality of Knowledge on Semantic Web. - Kaustubh Supekar; Chintan Patel; Yugyung Lee (FLAIRS, 2004)

Provisioning Resilient, Adaptive Web Services-based Workflow: A Semantic Modeling Approach. - Chintan Patel; Kaustubh Supekar; Yugyung Lee (ICWS, 2004)

BEE-SMART - A Natural Language Interface For Knowledge Retrieval and Service Execution over the Semantic Web2. - Kaustubh Supekar; Chintan Patel; Sachin Singh; Yugyung Lee (EMISA Forum, 2004)

Representing Lexical Components of Medical Terminologies in OWL. - Kaustubh Supekar; Christopher G. Chute; Harold R. Solbrig (AMIA, 2005)

Ontology Metadata to Support the Building of a Library of Biomedical Ontologies. - Kaustubh Supekar; Mark A. Musen (AMIA, 2005)

Ontology-based Annotation and Query of Tissue Microarray Data. - Nigam H. Shah; Daniel L. Rubin; Kaustubh S. Supekar; Mark A. Musen (AMIA, 2006)

Combining Text Classification and Hidden Markov Modeling Techniques for Structuring Randomized Clinical Trial Abstracts. - Rong Xu; Kaustubh S. Supekar; Yang Huang; Amar K. Das; Alan M. Garber (AMIA, 2006)

Topic-Specific Trust and Open Rating Systems: An Approach for Ontology Evaluation. - Holger Lewen; Kaustubh Supekar; Natalya Fridman Noy; Mark A. Musen (EON@WWW, 2006)

Ontology integration: Experience with medical terminologies. - Yugyung Lee; Kaustubh Supekar; James Geller (Comput. Biol. Medicine, 2006)

Knowledge Zone: A Public Repository of Peer-Reviewed Biomedical Ontologies. - Kaustubh Supekar; Daniel L. Rubin; Natasha F. Noy; Mark A. Musen (MedInfo, 2007)

Extracting Subject Demographic Information From Abstracts of Randomized Clinical Trial Reports. - Rong Xu; Yael Garten; Kaustubh S. Supekar; Amar K. Das; Russ B. Altman; Alan M. Garber (MedInfo, 2007)

Medical Imaging on the Semantic Web: Annotation and Image Markup. - Daniel L. Rubin; Pattanasak Mongkolwat; Vladimir Kleper; Kaustubh Supekar; David S. Channin (AAAI Spring Symposium: Semantic Scientific Knowledge Integration, 2008)

Unsupervised Method for Automatic Construction of a Disease Dictionary from a Large Free Text Collection. - Rong Xu; Kaustubh S. Supekar; Alex Morgan 001; Amar K. Das; Alan M. Garber (AMIA, 2008)

Network Analysis of Intrinsic Functional Brain Connectivity in Alzheimer's Disease. - Kaustubh Supekar; Vinod Menon; Daniel L. Rubin; Mark A. Musen; Michael D. Greicius (PLoS Comput. Biol., 2008)

Annotation and Image Markup: Accessing and Interoperating with the Semantic Content in Medical Imaging. - Daniel L. Rubin; Pattanasak Mongkolwat; Vladimir Kleper; Kaustubh Supekar; David S. Channin (IEEE Intell. Syst., 2009)

Sparse logistic regression for whole-brain classification of fMRI data. - Srikanth Ryali; Kaustubh Supekar; Daniel A. Abrams; Vinod Menon (NeuroImage, 2010)

Development of functional and structural connectivity within the default mode network in young children. - Kaustubh Supekar; Lucina Q. Uddin; Katherine Prater; Hitha Amin; Michael D. Greicius; Vinod Menon (NeuroImage, 2010)

Multivariate dynamical systems models for estimating causal interactions in fMRI. - Srikanth Ryali; Kaustubh Supekar; Tianwen Chen; Vinod Menon (NeuroImage, 2011)

Estimation of functional connectivity in fMRI data using stability selection-based sparse partial correlation with elastic net penalty. - Srikanth Ryali; Tianwen Chen; Kaustubh Supekar; Vinod Menon (NeuroImage, 2012)

Developmental Maturation of Dynamic Causal Control Signals in Higher-Order Cognition: A Neurocognitive Network Model. - Kaustubh Supekar; Vinod Menon (PLoS Comput. Biol., 2012)

A parcellation scheme based on von Mises-Fisher distributions and Markov random fields for segmenting brain regions using resting-state fMRI. - Srikanth Ryali; Tianwen Chen; Kaustubh Supekar; Vinod Menon (NeuroImage, 2013)

Combining optogenetic stimulation and fMRI to validate a multivariate dynamical systems model for estimating causal brain interactions. - Srikanth Ryali; Yen-Yu Ian Shih; Tianwen Chen; John Kochalka; Daniel L. Albaugh; Zhongnan Fang; Kaustubh Supekar; Jin Hyung Lee; Vinod Menon (NeuroImage, 2016)

Temporal Dynamics and Developmental Maturation of Salience, Default and Central-Executive Network Interactions Revealed by Variational Bayes Hidden Markov Modeling. - Srikanth Ryali; Kaustubh Supekar; Tianwen Chen; John Kochalka; Weidong Cai 002; Jonathan Nicholas; Aarthi Padmanabhan; Vinod Menon (PLoS Comput. Biol., 2016)

Bayesian switching factor analysis for estimating time-varying functional connectivity in fMRI. - Jalil Taghia; Srikanth Ryali; Tianwen Chen; Kaustubh Supekar; Weidong Cai 002; Vinod Menon (NeuroImage, 2017)

Methylphenidate remediates aberrant brain network dynamics in children with attention-deficit/hyperactivity disorder: A randomized controlled trial. - Yoshifumi Mizuno; Weidong Cai 002; Kaustubh Supekar; Kai Makita; Shinichiro Takiguchi; Akemi Tomoda; Vinod Menon (NeuroImage, 2022)