Linear-scaling molecular orbital calculations for the pKa values of ionizable residues in proteins. - Kazuki Ohno; Minoru Sakurai (J. Comput. Chem., 2006)

Large-Scale Computing for Protein-Protein Binding Free Energy Calculation. - Junichi Ikeda; Kazuki Ohno; Sayaka Akioka; Masaya Orita; Yoichi Muraoka; Tamotsu Noguchi; Masakazu Sekijima (PDPTA, 2008)

In Silico Fragment Screening by Replica Generation (FSRG) Method for Fragment-Based Drug Design. - Yoshifumi Fukunishi; Tadaaki Mashimo; Masaya Orita; Kazuki Ohno; Haruki Nakamura (J. Chem. Inf. Model., 2009)

Small-World Phenomena in Chemical Library Networks: Application to Fragment-Based Drug Discovery. - Naoki Tanaka; Kazuki Ohno; Tatsuya Niimi; Ayako Moritomo; Kenichi Mori; Masaya Orita (J. Chem. Inf. Model., 2009)

Selection of In Silico Drug Screening Results by Using Universal Active Probes (UAPs). - Yoshifumi Fukunishi; Kazuki Ohno; Masaya Orita; Haruki Nakamura (J. Chem. Inf. Model., 2010)

Are There Differences between Launched Drugs, Clinical Candidates, and Commercially Available Compounds? - Kazuki Ohno; Yuichi Nagahara; Kazuhisa Tsunoyama; Masaya Orita (J. Chem. Inf. Model., 2010)