Computational Genome-Wide Discovery of Aberrant Splice Variations with Exon Expression Profiles. - Ryo Yoshida; Kazuyuki Numata; Seiya Imoto; Masao Nagasaki; Atsushi Doi; Kazuko Ueno; Satoru Miyano (BIBE, 2007)

Simulation-based model checking approach to cell fate specification during Caenorhabditis elegans vulval development by hybrid functional Petri net with extension. - Chen Li 007; Masao Nagasaki; Kazuko Ueno; Satoru Miyano (BMC Syst. Biol., 2009)

Systems biology model repository for macrophage pathway simulation. - Masao Nagasaki; Ayumu Saito; André Fujita; Georg Tremmel; Kazuko Ueno; Emi Ikeda; Euna Jeong; Satoru Miyano (Bioinform., 2011)

Ontology-based instance data validation for high-quality curated biological pathways. - Euna Jeong; Masao Nagasaki; Kazuko Ueno; Satoru Miyano (BMC Bioinform., 2011)