Seeing Is Knowing: Visualization of Parameter-Parameter Dependencies in Biomedical Network Models. - Akihiko Konagaya; Ryuzo Azuma; Ryo Umetsu; Shingo Ohki; Fumikazu Konishi; Kazumi Matsumura; Sumi Yoshikawa (Grid Computing for Bioinformatics and Computational Biology, 2007)

Discovering Dynamic Characteristics of Biochemical Pathways using Geometric Patterns among Parameter-Parameter Dependencies in Differential Equations. - Ryuzo Azuma; Ryo Umetsu; Shingo Ohki; Fumikazu Konishi; Sumi Yoshikawa; Akihiko Konagaya; Kazumi Matsumura (New Gener. Comput., 2007)

Drug interaction prediction using ontology-driven hypothetical assertion framework for pathway generation followed by numerical simulation. - Takeshi Arikuma; Sumi Yoshikawa; Ryuzo Azuma; Kentaro Watanabe; Kazumi Matsumura; Akihiko Konagaya (BMC Bioinform., 2008)