RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome. - Tetsuya Sakurai; Masakazu Satou; Kenji Akiyama; Kei Iida; Motoaki Seki; Takashi Kuromori; Takuya Ito; Akihiko Konagaya; Tetsuro Toyoda; Kazuo Shinozaki (Nucleic Acids Res., 2005)

A Secure Data Repository Integrating Huge Volumes of Digital Contents as a Semantic Web. - Norio Kobayashi; Yuko Makita; Eli Kaminuma; Shuji Kawaguchi; Yuko Yoshida; Yoshiki Mochizuki; Akihiro Matsushima; Manabu Ishii; Ryo Umetsu; Satomi Asano; Naohiko Heida; Tetsuya Sakurai; et al. (SWAT4LS, 2008)

PRIMe: A Web Site That Assembles Tools for Metabolomics and Transcriptomics. - Kenji Akiyama; Eisuke Chikayama; Hiroaki Yuasa; Yukihisa Shimada; Takayuki Tohge; Kazuo Shinozaki; Masami Y. Hirai; Tetsuya Sakurai; Jun Kikuchi; Kazuki Saito (Silico Biol., 2008)

sORF finder: a program package to identify small open reading frames with high coding potential. - Kousuke Hanada; Kenji Akiyama; Tetsuya Sakurai; Tetsuro Toyoda; Kazuo Shinozaki; Shin-Han Shiu (Bioinform., 2010)

LegumeTFDB: an integrative database of Glycine max, Lotus japonicus and Medicago truncatula transcription factors. - Keiichi Mochida; Takuhiro Yoshida; Tetsuya Sakurai; Kazuko Yamaguchi-Shinozaki; Kazuo Shinozaki; Lam-Son Phan Tran (Bioinform., 2010)

Positional correlation analysis improves reconstruction of full-length transcripts and alternative isoforms from noisy array signals or short reads. - Shuji Kawaguchi; Kei Iida; Erimi Harada; Kousuke Hanada; Akihiro Matsui; Masanori Okamoto; Kazuo Shinozaki; Motoaki Seki; Tetsuro Toyoda (Bioinform., 2012)

Correlations between predicted protein disorder and post-translational modifications in plants. - Atsushi Kurotani; Alexander A. Tokmakov; Yutaka Kuroda; Yasuo Fukami; Kazuo Shinozaki; Tetsuya Sakurai (Bioinform., 2014)