Automated detection of pulmonary nodules from low-dose computed tomography scans using a two-stage classification system based on local image features. - Keelin Murphy; Arnold M. R. Schilham; Hester A. Gietema; Mathias Prokop; Bram van Ginneken (Computer-Aided Diagnosis, 2007)

Automated detection of nodules attached to the pleural and mediastinal surface in low-dose CT scans. - Bram van Ginneken; Andre Tan; Keelin Murphy; Bart-Jan de Hoop; Mathias Prokop (Computer-Aided Diagnosis, 2008)

Semi-automatic Reference Standard Construction for Quantitative Evaluation of Lung CT Registration. - Keelin Murphy; Bram van Ginneken; Josien P. W. Pluim; Stefan Klein 001; Marius Staring (MICCAI (2), 2008)

Evaluation of 4D-CT Lung Registration. - Sven Kabus; Tobias Klinder; Keelin Murphy; Bram van Ginneken; Cristian Lorenz; Josien P. W. Pluim (MICCAI (1), 2009)

Automatic detection of registration errors for quality assessment in medical image registration. - Sascha E. A. Muenzing; Keelin Murphy; Bram van Ginneken; Josien P. W. Pluim (Image Processing, 2009)

A large-scale evaluation of automatic pulmonary nodule detection in chest CT using local image features and k-nearest-neighbour classification. - Keelin Murphy; Bram van Ginneken; Arnold M. R. Schilham; Bartjan de Hoop; H. A. Gietema; Mathias Prokop (Medical Image Anal., 2009)

Comparing and combining algorithms for computer-aided detection of pulmonary nodules in computed tomography scans: The ANODE09 study. - Bram van Ginneken; Samuel G. Armato III; Bartjan de Hoop; Saskia van Amelsvoort-van de Vorst; Thomas Duindam; Meindert Niemeijer; Keelin Murphy; Arnold M. R. Schilham; Alessandra Retico; Maria Evelina Fantacci; Niccolò Camarlinghi; Francesco Bagagli; et al. (Medical Image Anal., 2010)

elastix: A Toolbox for Intensity-Based Medical Image Registration. - Stefan Klein 001; Marius Staring; Keelin Murphy; Max A. Viergever; Josien P. W. Pluim (IEEE Trans. Medical Imaging, 2010)

Semi-automatic construction of reference standards for evaluation of image registration. - Keelin Murphy; Bram van Ginneken; Stefan Klein 001; Marius Staring; Bartjan de Hoop; Max A. Viergever; Josien P. W. Pluim (Medical Image Anal., 2011)

Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge. - Keelin Murphy; Bram van Ginneken; Joseph M. Reinhardt; Sven Kabus; Kai Ding 003; Xiang Deng; Kunlin Cao; Kaifang Du; Gary E. Christensen; Vincent Garcia; Tom Vercauteren; Nicholas Ayache; et al. (IEEE Trans. Medical Imaging, 2011)

Supervised quality assessment of medical image registration: Application to intra-patient CT lung registration. - Sascha E. A. Muenzing; Bram van Ginneken; Keelin Murphy; Josien P. W. Pluim (Medical Image Anal., 2012)

The truth is hard to make: Validation of medical image registration. - Josien P. W. Pluim; Sascha E. A. Muenzing; Koen A. J. Eppenhof; Keelin Murphy (ICPR, 2016)

A survey of medical image registration - under review. - Max A. Viergever; J. B. Antoine Maintz; Stefan Klein 001; Keelin Murphy; Marius Staring; Josien P. W. Pluim (Medical Image Anal., 2016)

Handling label noise through model confidence and uncertainty: application to chest radiograph classification. - Erdi Calli; Ecem Sogancioglu; Ernst Th. Scholten; Keelin Murphy; Bram van Ginneken (Computer-Aided Diagnosis, 2019)

Computer aided detection of tuberculosis on chest radiographs: An evaluation of the CAD4TB v6 system. - Keelin Murphy; Shifa Salman Habib; Syed Mohammad Asad Zaidi; Saira Khowaja; Aamir Khan; Jaime Melendez; Ernst Th. Scholten; Farhan Amad; Steven Schalekamp; Maurits Verhagen; Rick H. H. M. Philipsen; Annet Meijers; et al. (CoRR, 2019)

FRODO: Free rejection of out-of-distribution samples: application to chest x-ray analysis. - Erdi Çalli; Keelin Murphy; Ecem Sogancioglu; Bram van Ginneken (CoRR, 2019)

Cardiomegaly Detection on Chest Radiographs: Segmentation Versus Classification. - Ecem Sogancioglu; Keelin Murphy; Erdi Calli; Ernst Th. Scholten; Steven Schalekamp; Bram van Ginneken (IEEE Access, 2020)

Deep Learning with robustness to missing data: A novel approach to the detection of COVID-19. - Erdi Çalli; Keelin Murphy; Steef Kurstjens; Tijs Samson; Robert Herpers; Henk Smits; Matthieu Rutten; Bram van Ginneken (CoRR, 2021)

Automated Estimation of Total Lung Volume using Chest Radiographs and Deep Learning. - Ecem Sogancioglu; Keelin Murphy; Ernst Th. Scholten; Luuk H. Boulogne; Mathias Prokop; Bram van Ginneken (CoRR, 2021)

Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning. - Alessa Hering; Lasse Hansen; Tony C. W. Mok; Albert C. S. Chung; Hanna Siebert; Stephanie Häger; Annkristin Lange; Sven Kuckertz; Stefan Heldmann; Wei Shao 008; Sulaiman Vesal; Mirabela Rusu; et al. (CoRR, 2021)

Deep learning for chest X-ray analysis: A survey. - Erdi Çalli; Ecem Sogancioglu; Bram van Ginneken; Kicky G. van Leeuwen; Keelin Murphy (Medical Image Anal., 2021)

NODE21. - Ecem Sogancioglu; Keelin Murphy; Bram van Ginneken (Zenodo, 2021)

NODE21. - Ecem Sogancioglu; Keelin Murphy; Bram van Ginneken (Zenodo, 2021)

Learn2Reg: Comprehensive Multi-Task Medical Image Registration Challenge, Dataset and Evaluation in the Era of Deep Learning. - Alessa Hering; Lasse Hansen; Tony C. W. Mok; Albert C. S. Chung; Hanna Siebert; Stephanie Häger; Annkristin Lange; Sven Kuckertz; Stefan Heldmann; Wei Shao 008; Sulaiman Vesal; Mirabela Rusu; et al. (IEEE Trans. Medical Imaging, 2023)

FRODO: An In-Depth Analysis of a System to Reject Outlier Samples From a Trained Neural Network. - Erdi Calli; Bram van Ginneken; Ecem Sogancioglu; Keelin Murphy (IEEE Trans. Medical Imaging, 2023)

Nodule Detection and Generation on Chest X-Rays: NODE21 Challenge. - Ecem Sogancioglu; Bram van Ginneken; Finn Behrendt; Marcel Bengs; Alexander Schlaefer; Miron Radu; Di Xu; Ke Sheng; Fabien Scalzo; Eric Marcus; Samuele Papa; Jonas Teuwen; et al. (IEEE Trans. Medical Imaging, 2024)

ACOUSLIC-AI challenge report: Fetal abdominal circumference measurement on blind-sweep ultrasound data from low-income countries. - M. Sofia Sappia; Chris L. de Korte; Bram van Ginneken; Dean Ninalga; Satoshi Kondo; Satoshi Kasai; Kousuke Hirasawa; Tanya Akumu; Carlos Martín-Isla; Karim Lekadir; Víctor M. Campello; Jorge Fabila; et al. (Medical Image Anal., 2025)