QCHARM: A Novel Computational and Scientific Visualization Framework for Facilitating Discovery and Improving Diagnostic Reliability in Medicine. - Brian A. Canada; Keith C. Cheng; James Ze Wang (AMIA, 2006)

Towards efficient automated characterization of irregular histology images via transformation to frieze-like patterns. - Brian A. Canada; Georgia K. Thomas; Keith C. Cheng; James Ze Wang; Yanxi Liu 001 (CIVR, 2008)

Automatic lattice detection in near-regular histology array images. - Brian A. Canada; Georgia K. Thomas; Keith C. Cheng; James Ze Wang; Yanxi Liu 001 (ICIP, 2008)

A Case Study in Using ZFA and PATO for Describing Histological Phenotypes in the Larval Zebrafish. - Brian A. Canada; Georgia K. Thomas; Timothy Cooper; Keith C. Cheng (ICBO, 2011)

SHIRAZ and CABERNET: Leveraging Automation, Crowdsourcing, and Ontologies to Improve the Accuracy and Throughput of Zebrafish Histological Phenotype Annotations. - Brian A. Canada; Georgia K. Thomas; John Schleicher; James Ze Wang; Keith C. Cheng (ICBO, 2011)

An Ontology-Based Approach to Linking Model Organisms and Resources to Human Diseases. - Chris Mungall; David Anderson; Anita E. Bandrowski; Brian A. Canada; Andrew Chatr-aryamontri; Keith C. Cheng; P. Michael Conn; Kara Dolinski; Mark H. Ellisman; Janan T. Eppig; Jeffrey S. Grethe; Joseph W. Kemnitz; et al. (ICBO, 2011)

SHIRAZ: an automated histology image annotation system for zebrafish phenomics. - Brian A. Canada; Georgia K. Thomas; Keith C. Cheng; James Ze Wang (Multim. Tools Appl., 2011)

Supervised machine learning for region assignment of zebrafish brain nuclei based on computational assessment of cell neighborhoods. - Samarth Gupta; Yuan Xue 002; Yifu Ding; Daniel Vanselow; Maksim Yakovlev; Damian B. van Rossum; Sharon X. Huang; Keith C. Cheng (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2020)

Synthetic Sample Selection via Reinforcement Learning. - Jiarong Ye; Yuan Xue 002; L. Rodney Long; Sameer K. Antani; Zhiyun Xue; Keith C. Cheng; Xiaolei Huang 001 (MICCAI (1), 2020)

Zebrafish Histotomography Noise Removal In Projection And Reconstruction Domains. - Amogh Subbakrishna Adishesha; Daniel J. Vanselow; Patrick J. La Rivière; Xiaolei Huang 001; Keith C. Cheng (ISBI, 2021)

A Multi-attribute Controllable Generative Model for Histopathology Image Synthesis. - Jiarong Ye; Yuan Xue 002; Peter Liu; Richard Zaino; Keith C. Cheng; Xiaolei Huang 001 (MICCAI (8), 2021)

Selective synthetic augmentation with HistoGAN for improved histopathology image classification. - Yuan Xue 002; Jiarong Ye; Qianying Zhou; L. Rodney Long; Sameer K. Antani; Zhiyun Xue; Carl Cornwell; Richard Zaino; Keith C. Cheng; Xiaolei Huang 001 (Medical Image Anal., 2021)

Sinogram domain angular upsampling of sparse-view micro-CT with dense residual hierarchical transformer and attention-weighted loss. - Amogh Subbakrishna Adishesha; Daniel J. Vanselow; Patrick J. La Rivière; Keith C. Cheng; Sharon X. Huang (Comput. Methods Programs Biomed., 2023)