Bioinformatics Strategies for Identifying Regions of Epigenetic Deregulation Associated with Aberrant Transcript Splicing and RNA-editing. - Mia D. Champion; Ryan A. Hlady; Huihuang Yan; Jared Evans; Jeff Nie; Jeong-Heon Lee; James M. Bogenberger; Kannabiran Nandakumar; Jaime I. Dávila; Raymond M. Moore; Asha A. Nair; Daniel R. O'Brien; et al. (BIOINFORMATICS, 2015)

iTagPlot: an accurate computation and interactive drawing tool for tag density plot. - Sung-Hwan Kim; Onyeka Ezenwoye; Hwan-Gue Cho; Keith D. Robertson; Jeong-Hyeon Choi (Bioinform., 2015)

CAME: identification of chromatin accessibility from nucleosome occupancy and methylome sequencing. - Yongjun Piao; Seongkeon Lee; Eun-Joon Lee; Keith D. Robertson; Huidong Shi (Bioinform., 2017)

CpGtools: a python package for DNA methylation analysis. - Ting Wei; Jinfu J. Nie; Nicholas B. Larson; Zhenqing Ye; Jeanette E. Eckel-Passow; Keith D. Robertson; Jean-Pierre A. Kocher; Liguo Wang 002 (Bioinform., 2021)