A New Approach to Protein Structure Mining and Alignment. - Hongyuan Li; Keith Marsolo; Srinivasan Parthasarathy 001; Dmitrii Polshakov (BIOKDD, 2004)

Discovering Spatial Relationships Between Approximately Equivalent Patterns in Contact Maps. - Keith Marsolo; Hui Yang 002; Srinivasan Parthasarathy 001; Sameep Mehta (BIOKDD, 2004)

A Model-Based Approach to Visualizing Classification Decisions for Patient Diagnosis. - Keith Marsolo; Srinivasan Parthasarathy 001; Michael D. Twa; Mark Bullimore (AIME, 2005)

A Multi-Level Approach to SCOP Fold Recognition. - Keith Marsolo; Srinivasan Parthasarathy 001; Chris H. Q. Ding (BIBE, 2005)

Classification of Biomedical Data through Model-Based Spatial Averaging. - Keith Marsolo; Srinivasan Parthasarathy 001; Michael D. Twa; Mark Bullimore (BIBE, 2005)

Alternate Representation of Distance Matrices for Characterization of Protein Structure. - Keith Marsolo; Srinivasan Parthasarathy 001 (ICDM, 2005)

Structure-based querying of proteins using wavelets. - Keith Marsolo; Srinivasan Parthasarathy 001; Kotagiri Ramamohanarao (CIKM, 2006)

Spatial Modeling and Classification of Corneal Shape. - Keith Marsolo; Michael D. Twa; Mark Bullimore; Srinivasan Parthasarathy 001 (IEEE Trans. Inf. Technol. Biomed., 2007)

On the use of structure and sequence-based features for protein classification and retrieval. - Keith Marsolo; Srinivasan Parthasarathy 001 (Knowl. Inf. Syst., 2008)

Biomedical Data Mining, Spatial. - Keith Marsolo; Michael D. Twa; Mark Bullimore; Srinivasan Parthasarathy 001 (Encyclopedia of GIS, 2008)

Building Gold Standard Corpora for Medical Natural Language Processing Tasks. - Louise Deléger; Qi Li 004; Todd Lingren; Megan Kaiser; Katalin Molnár; Laura Stoutenborough; Michal Kouril; Keith Marsolo; Imre Solti (AMIA, 2012)

Challenges in creating an opt-in biobank with a registrar-based consent process and a commercial EHR. - Keith Marsolo; Jeremy Corsmo; Michael G. Barnes; Carrie Pollick; Jamie Chalfin; Jeremy Nix; Christopher Smith; Rajesh Ganta (J. Am. Medical Informatics Assoc., 2012)

Large-scale evaluation of automated clinical note de-identification and its impact on information extraction. - Louise Deléger; Katalin Molnár; Guergana Savova; Fei Xia 004; Todd Lingren; Qi Li 004; Keith Marsolo; Anil G. Jegga; Megan Kaiser; Laura Stoutenborough; Imre Solti (J. Am. Medical Informatics Assoc., 2013)

Informatics and operations - let's get integrated. - Keith Marsolo (J. Am. Medical Informatics Assoc., 2013)

An i2b2-based, generalizable, open source, self-scaling chronic disease registry. - Marc D. Natter; Justin Quan; David M. Ortiz; Athos Bousvaros; Norman T. Ilowite; Christi J. Inman; Keith Marsolo; Andrew J. McMurry; Christy Sandborg; Laura E. Schanberg; Carol A. Wallace; Robert W. Warren; et al. (J. Am. Medical Informatics Assoc., 2013)

Brief communication: PEDSnet: a National Pediatric Learning Health System. - Christopher B. Forrest; Peter A. Margolis; L. Charles Bailey; Keith Marsolo; Mark A. Del Beccaro; Jonathan A. Finkelstein; David E. Milov; Veronica J. Vieland; Bryan A. Wolf; Feliciano B. Yu; Michael G. Kahn (J. Am. Medical Informatics Assoc., 2014)

Brief communication: Scalable Collaborative Infrastructure for a Learning Healthcare System (SCILHS): Architecture. - Kenneth D. Mandl; Isaac S. Kohane; Douglas McFadden; Griffin M. Weber; Marc D. Natter; Joshua C. Mandel; Sebastian Schneeweiss; Sarah Weiler; Jeffrey G. Klann; Jonathan P. Bickel; William G. Adams; Yaorong Ge; et al. (J. Am. Medical Informatics Assoc., 2014)

Preparing an annotated gold standard corpus to share with extramural investigators for de-identification research. - Louise Deléger; Todd Lingren; Yizhao Ni; Megan Kaiser; Laura Stoutenborough; Keith Marsolo; Michal Kouril; Katalin Molnár; Imre Solti (J. Biomed. Informatics, 2014)

Identifying and Understanding Data Quality Issues in a Pediatric Distributed Research Network. - Ritu Khare; Levon Utidjian; Gregory Schulte; Keith Marsolo; Charles Bailey 001 (AMIA, 2015)

Iterative Design and Modeling for the PCORnet Common Data Model v3.0. - Shelley A. Rusincovitch; Jeffrey S. Brown; Keith Marsolo; Jenny Ibarra; Abel N. Kho; Daniella Meeker; Lesley H. Curtis (CRI, 2016)

Assessment of Factors and Approaches to Mapping Laboratory Results in PCORnet. - Michelle M. Smerek; Elisa Priest; Samuel T. Rosenbloom; Jon Puro; Pedro Rivera; Shelley A. Rusincovitch; Rahul Jain; Keith Marsolo (CRI, 2016)

Developing an Algorithm to Detect Early Childhood Obesity in Two Tertiary Pediatric Medical Centers. - Cassandra Brady; Bahram Namjou; Stephanie Kennebeck; Jonathan Bickel; Nandan Patibandla; Yizhao Ni; Sara Van Driest; Lixin Chen; Ashton Roach; Beth Cobb; Jacqueline Kirby; Joshua C. Denny; et al. (Appl. Clin. Inform., 2016)

The PCORnet Learning Cycle. - Keith Marsolo; Laura G. Qualls; Bradley G. Hammill; Jeffrey S. Brown; Lesley H. Curtis (AMIA, 2017)

Strategic Assessment and Planning for the PCORnet Common Data Model. - Ania Berchuck; Michael G. Kahn; Shelley A. Rusincovitch; Daniella Meeker; Shawn N. Murphy; Ravi Bhosale; Keith Marsolo; Michael E. Matheny; L. Russell Waitman; Rachel Hess (CRI, 2017)

Is an Algorithm Just an Algorithm? How to Define Clinical Concepts for Use in Comparative Safety and Effectiveness Distributed Research Networks. - Jeffrey S. Brown; Robert Ball; David S. Carrell; Leonard W. D'Avolio; Keith Marsolo (CRI, 2017)

A longitudinal analysis of data quality in a large pediatric data research network. - Ritu Khare; Levon Utidjian; Byron J. Ruth; Michael G. Kahn; Evanette Burrows; Keith Marsolo; Nandan Patibandla; Hanieh Razzaghi; Ryan Colvin; Daksha Ranade; Melody Kitzmiller; Daniel Eckrich; et al. (J. Am. Medical Informatics Assoc., 2017)

Biases introduced by filtering electronic health records for patients with "complete data". - Griffin M. Weber; William G. Adams; Elmer V. Bernstam; Jonathan P. Bickel; Kathe P. Fox; Keith Marsolo; Vijay A. Raghavan; Alexander Turchin; Xiaobo Zhou; Shawn N. Murphy; Kenneth D. Mandl (J. Am. Medical Informatics Assoc., 2017)

Biomedical Data Mining, Spatial. - Keith Marsolo; Michael D. Twa; Mark A. Bullimore; Srinivasan Parthasarathy 001 (Encyclopedia of GIS, 2017)

National Patient-Centered Clinical Research Network (PCORnet) Distributed Research Network (DRN): Questions Answered from Preparatory-to-Research to Comparative Effectiveness. - Jessica L. Sturtevant; Darcy Louzao; Keith Marsolo; Kathleen McTigue; Lesley H. Curtis (AMIA, 2018)

Electronic medical records as a replacement for prospective research data collection in postoperative pain and opioid response studies. - Todd Lingren; Senthilkumar Sadhasivam; Xue Zhang; Keith Marsolo (Int. J. Medical Informatics, 2018)

Empowering genomic medicine by establishing critical sequencing result data flows: the eMERGE example. - Samuel J. Aronson; Lawrence J. Babb; Darren C. Ames; Richard A. Gibbs; Eric Venner; John J. Connelly; Keith Marsolo; Chunhua Weng; Marc S. Williams; Andrea L. Hartzler; Wayne H. Liang; James D. Ralston; et al. (J. Am. Medical Informatics Assoc., 2018)

Accuracy of the medication list in the electronic health record - implications for care, research, and improvement. - Kathleen E. Walsh; Keith Marsolo; Cori Davis; Theresa Todd; Bernadette Martineau; Carlie Arbaugh; Frederique Verly; Charles Samson; Peter A. Margolis (J. Am. Medical Informatics Assoc., 2018)

Advancing the Collection and Integration of Patient-reported Outcome Data Implementation Architectures Using FHIR® Technical Specifications. - Chun-Ju Hsiao; Stephanie Garcia; Daniella Meeker; Joseph Blumenthal; Keith Marsolo (AMIA, 2019)

Design and analytic considerations for using patient-reported health data in pragmatic clinical trials: report from an NIH Collaboratory roundtable. - Frank W. Rockhold; Jessica D. Tenenbaum; Rachel L. Richesson; Keith A. Marsolo; Emily C. O'Brien (J. Am. Medical Informatics Assoc., 2020)

Reliable insights regarding medication outcomes from real world data- key principles of an evidence generation framework. - Rishi J. Desai; Sebastian Schneeweiss; Keith Marsolo; Shirley V. Wang; Robert Ball (AMIA, 2021)

U.S. COVID-19 Surveillance in PCORnet®. - Sheryl A. Kluberg; Thomas Carton; Charles Bailey 001; Julia A. Fearrington; Keith Marsolo; Kshema M. Nagavedu; Jon Puro; Jason P. Block (AMIA, 2021)

Enhancing the use of EHR systems for pragmatic embedded research: lessons from the NIH Health Care Systems Research Collaboratory. - Rachel L. Richesson; Keith A. Marsolo; Brian J. Douthit; Karen L. Staman; P. Michael Ho; Dana L. Dailey; Andrew D. Boyd; Kathleen McTigue; Miriam O. Ezenwa; Judith M. Schlaeger; Crystal L. Patil; Keturah R. Faurot; et al. (J. Am. Medical Informatics Assoc., 2021)

Broadening the reach of the FDA Sentinel system: A roadmap for integrating electronic health record data in a causal analysis framework. - Rishi J. Desai; Michael E. Matheny; Kevin Johnson; Keith Marsolo; Lesley H. Curtis; Jennifer C. Nelson; Patrick J. Heagerty; Judith C. Maro; Jeffrey S. Brown; Sengwee Toh; Michael D. Nguyen; Robert Ball; et al. (npj Digit. Medicine, 2021)

Standardizing, harmonizing, and protecting data collection to broaden the impact of COVID-19 research: the rapid acceleration of diagnostics-underserved populations (RADx-UP) initiative. - Gabriel A. Carrillo; Michael Cohen-Wolkowiez; Emily M. D'agostino; Keith Marsolo; Lisa M. Wruck; Laura Johnson; James Topping; Al Richmond; Giselle Corbie; Warren A. Kibbe (J. Am. Medical Informatics Assoc., 2022)

Evaluating fitness-for-use of electronic health records in pragmatic clinical trials: reported practices and recommendations. - Sudha R. Raman; Emily C. O'Brien; Bradley G. Hammill; Adam J. Nelson; Laura J. Fish; Lesley H. Curtis; Keith Marsolo (J. Am. Medical Informatics Assoc., 2022)

Mis-mappings between a producer's quantitative test codes and LOINC codes and an algorithm for correcting them. - Clement J. McDonald; Seo H. Baik; Zhaonian Zheng; Liz Amos; Xiaocheng Luan; Keith Marsolo; Laura G. Qualls (J. Am. Medical Informatics Assoc., 2023)

Assessing the impact of privacy-preserving record linkage on record overlap and patient demographic and clinical characteristics in PCORnet®, the National Patient-Centered Clinical Research Network. - Keith Marsolo; Daniel Kiernan; Sengwee Toh; Jasmin Phua; Darcy Louzao; Kevin Haynes; Mark G. Weiner; Francisco Angulo; Charles Bailey 001; Jiang Bian 001; Daniel Fort; Shaun J. Grannis; et al. (J. Am. Medical Informatics Assoc., 2023)

Potential bias and lack of generalizability in electronic health record data: reflections on health equity from the National Institutes of Health Pragmatic Trials Collaboratory. - Andrew D. Boyd; Rosa Gonzalez-Guarda; Katharine Lawrence; Crystal L. Patil; Miriam O. Ezenwa; Emily C. O'Brien; Hyung Paek; Jordan M. Braciszewski; Oluwaseun Adeyemi; Allison M. Cuthel; Juanita E. Darby; Christina K. Zigler; et al. (J. Am. Medical Informatics Assoc., 2023)