E-CELL: software environment for whole-cell simulation. - Masaru Tomita; Kenta Hashimoto; Koichi Takahashi; Thomas Simon Shimizu; Yuri Matsuzaki; Fumihiko Miyoshi; Kanako Saito; Sakura Tanida; Katsuyuki Yugi; J. Craig Venter; Clyde A. Hutchison III (Bioinform., 1999)

The E-CELL project: towards integrative simulation of cellular processes. - Masaru Tomita; Kenta Hashimoto; Koichi Takahashi; Yuri Matsuzaki; Ryo Matsushima; Katsuyuki Yugi; Fumihiko Miyoshi; Hisako Nakano; Yusuke Saito; Tom Shimizu; Yoichi Nakayama (RECOMB, 2000)

On-Line Multicasting in All-Optical Networks. - Kenta Hashimoto; Toshinori Yamada; Shuichi Ueno (ISAAC, 2001)

Integrative modeling of gene expression and metabolism with E-CELL System. - Kenta Hashimoto; Sae Seno; Pawan Kumar Dhar; Masaru Tomita (Artif. Life Robotics, 2002)

Computational Challenges in Cell Simulation: A Software Engineering Approach. - Kouichi Takahashi; Katsuyuki Yugi; Kenta Hashimoto; Yohei Yamada; Christopher J. F. Pickett; Masaru Tomita (IEEE Intell. Syst., 2002)

Novel Deblocking Method for Cropped Video. - Kenta Hashimoto; Seiichi Gohshi (ISPACS, 2019)