Structural fragment clustering reveals novel structural and functional motifs in alpha-helical transmembrane proteins. - Annalisa Marsico; Andreas Henschel; Christof Winter; Anne Tuukkanen; Boris Vassilev; Kerstin Scheubert; Michael Schroeder 001 (BMC Bioinform., 2010)

MeMotif: a database of linear motifs in α-helical transmembrane proteins. - Annalisa Marsico; Kerstin Scheubert; Anne Tuukkanen; Andreas Henschel; Christof Winter; Rainer Winnenburg; Michael Schroeder 001 (Nucleic Acids Res., 2010)

Computing Fragmentation Trees from Metabolite Multiple Mass Spectrometry Data. - Kerstin Scheubert; Franziska Hufsky; Florian Rasche; Sebastian Böcker (J. Comput. Biol., 2011)

Computational mass spectrometry for small molecules. - Kerstin Scheubert; Franziska Hufsky; Sebastian Böcker (J. Cheminformatics, 2013)

Multiple Mass Spectrometry Fragmentation Trees Revisited: Boosting Performance and Quality. - Kerstin Scheubert; Franziska Hufsky; Sebastian Böcker (WABI, 2014)