Mediante: a web-based microarray data manager. - Kevin Le Brigand; Pascal Barbry (Bioinform., 2007)

MiRonTop: mining microRNAs targets across large scale gene expression studies. - Kevin Le Brigand; Karine Robbe-Sermesant; Bernard Mari; Pascal Barbry (Bioinform., 2010)

RiboProfiling: a Bioconductor package for standard Ribo-seq pipeline processing. - Alexandra Popa; Kevin Le Brigand; Agnes Paquet; Nicolas Nottet; Karine Robbe-Sermesant; Rainer Waldmann; Pascal Barbry (F1000Research, 2016)

OligoArchive: Using DNA in the DBMS storage hierarchy. - Raja Appuswamy; Kevin Le Brigand; Pascal Barbry; Marc Antonini; Olivier Madderson; Paul S. Freemont; James McDonald; Thomas Heinis (CIDR, 2019)

Detecting subtle transcriptomic perturbations induced by lncRNAs knock-down in single-cell CRISPRi screening using a new sparse supervised autoencoder neural network. - Marin Truchi; Caroline Lacoux; Cyprien Gille; Julien Fassy; Virginie Magnone; Rafael Lopes Goncalves; Cédric Girard Riboulleau; Iris Manosalva-Pena; Marine Gautier-Isola; Kevin Lebrigand; Pascal Barbry; Salvatore Spicuglia; et al. (Frontiers Bioinform., 2024)