Network-based protein structural classification. - Arash Rahnama; Khalique Newaz; Panos J. Antsaklis; Tijana Milenkovic (CoRR, 2018)

Weighted graphlets and deep neural networks for protein structure classification. - Hongyu Guo; Khalique Newaz; Scott J. Emrich; Tijana Milenkovic; Jun Li 052 (CoRR, 2019)

Network analysis of synonymous codon usage. - Khalique Newaz; Gabriel Wright; Jacob Piland; Jun Li 052; Patricia L. Clark; Scott J. Emrich; Tijana Milenkovic (Bioinform., 2020)

Improved supervised prediction of aging-related genes via weighted dynamic network analysis. - Qi Li 016; Khalique Newaz; Tijana Milenkovic (BMC Bioinform., 2021)

Inference of a Dynamic Aging-related Biological Subnetwork via Network Propagation. - Khalique Newaz; Tijana Milenkovic (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)