A Rapid Method for Calculating Derivatives of Solvent Accessible Surface Areas of Molecules. - S. Sridharan; Antony Nicholls; Kim A. Sharp (J. Comput. Chem., 1995)

Finite difference Poisson-Boltzmann electrostatic calculations: Increased accuracy achieved by harmonic dielectric smoothing and charge antialiasing. - Robert E. Bruccoleri; Jiri Novotny; Malcolm E. Davis; Kim A. Sharp (J. Comput. Chem., 1997)

Implementation and testing of stable, fast implicit solvation in molecular dynamics using the smooth-permittivity finite difference Poisson-Boltzmann method. - Ninad V. Prabhu; Peijuan Zhu; Kim A. Sharp (J. Comput. Chem., 2004)

Mapping Complicated Surfaces onto a Sphere. - Sahand Jamal Rahi; Kim A. Sharp (Int. J. Comput. Geom. Appl., 2007)

Explicit ion, implicit water solvation for molecular dynamics of nucleic acids and highly charged molecules. - Ninad V. Prabhu; Manoranjan Panda; Qingyi Yang; Kim A. Sharp (J. Comput. Chem., 2008)

Protein Pockets: Inventory, Shape, and Comparison. - Ryan G. Coleman; Kim A. Sharp (J. Chem. Inf. Model., 2010)

Translation of Ludwig Boltzmann's Paper "On the Relationship between the Second Fundamental Theorem of the Mechanical Theory of Heat and Probability Calculations Regarding the Conditions for Thermal Equilibrium" Sitzungberichte der Kaiserlichen Akademie der Wissenschaften. Mathematisch-Naturwissen Classe. Abt. II, LXXVI 1877, pp 373-435 (Wien. Ber. 1877 76: 373-435). Reprinted in Wiss. Abhandlungen, Vol. II, reprint 42, p. 164-223, Barth, Leipzig, 1909. - Kim A. Sharp; Franz Matschinsky (Entropy, 2015)

Computational Graphics Software for Interactive Docking and Visualization of Ligand-Protein Complementarity. - Saravana G. Baskaran; Thayne P. Sharp; Kim A. Sharp (J. Chem. Inf. Model., 2021)