How well do RNA-Seq differential gene expression tools perform in a complex eukaryote? A case study in Arabidopsis thaliana. - Kimon Froussios; Nick J. Schurch; Katarzyna Mackinnon; Marek Gierlinski; Céline Duc; Gordon G. Simpson; Geoffrey J. Barton (Bioinform., 2019)

Relative Abundance of Transcripts (RATs): Identifying differential isoform abundance from RNA-seq. - Kimon Froussios; Kira Mourão; Gordon G. Simpson; Geoffrey J. Barton; Nicholas J. Schurch (F1000Research, 2019)

Detection and mitigation of spurious antisense expression with RoSA. - Kira Mourão; Nicholas J. Schurch; Radek Lucoszek; Kimon Froussios; Katarzyna Mackinnon; Céline Duc; Gordon G. Simpson; Geoffrey J. Barton (F1000Research, 2019)