Protein Classification by Matching 3D Structures. - Slobodan Kalajdziski; Georgina Mirceva; Kire Trivodaliev; Danco Davcev (FBIT, 2007)

Multimedia Environment for Mobile Learning. - Danco Davcev; Slobodan Kalajdziski; Kire Trivodaliev (ICSNC, 2007)

Automated Structural Classification of Proteins by Using Decision Trees and Structural Protein Features. - Slobodan Kalajdziski; Bojan Pepik; Ilinka Ivanovska; Georgina Mirceva; Kire Trivodaliev; Danco Davcev (ICT Innovations, 2009)

Protein Function Prediction Based on Neighborhood Profiles. - Kire Trivodaliev; Ivana Cingovska; Slobodan Kalajdziski; Danco Davcev (ICT Innovations, 2009)

Protein Function Prediction by Spectral Clustering of Protein Interaction Network. - Kire Trivodaliev; Ivana Cingovska; Slobodan Kalajdziski (FGIT-DTA/BSBT, 2011)

Protein Function Prediction by Clustering of Protein-Protein Interaction Network. - Ivana Cingovska; Aleksandra Bogojeska; Kire Trivodaliev; Slobodan Kalajdziski (ICT Innovations, 2011)

Novel Gene Ontology Based Distance Metric for Function Prediction via Clustering in Protein Interaction Networks. - Kire Trivodaliev; Ilinka Ivanoska; Slobodan Kalajdziski; Ljupco Kocarev (ICT Innovations, 2014)

RS-fMRI Data Analysis for Identification of Changes in Functional Connectivity Networks of Bi-polar Patients. - Tommy Boshkovski; Ilinka Ivanoska; Kire Trivodaliev; Slobodan Kalajdziski; Pablo Villoslada; Magí Andorrà; Vesna Prckovska; Ljupco Kocarev (ICT Innovations, 2015)

Analysis of Protein Interaction Network for Colorectal Cancer. - Zlate Ristovski; Kire Trivodaliev; Slobodan Kalajdziski (ICT Innovations, 2016)

Toby the explorer - An interactive educational game for primary school pupils. - Nenad Kaevikj; Angela Kostadinovska; Marija Mihova; Kire Trivodaliev; Biljana L. Stojkoska (MIPRO, 2016)

Project Based Learning of Embedded Systems. - Danco Davcev; Biljana L. Stojkoska; Slobodan Kalajdziski; Kire Trivodaliev (CoRR, 2016)

Teaching computer programming: The macedonian case study of functional programming. - Kire Trivodaliev; Biljana Risteska Stojkoska; Marija Mihova; Mile Jovanov; Slobodan Kalajdziski (EDUCON, 2017)

Indoor localization of unmanned aerial vehicles based on RSSI. - Biljana Risteska Stojkoska; Jordan Palikrushev; Kire Trivodaliev; Slobodan Kalajdziski (EUROCON, 2017)

Internet of Things Framework for Home Care Systems. - Biljana Risteska Stojkoska; Kire Trivodaliev; Danco Davcev (Wirel. Commun. Mob. Comput., 2017)

Deep Learning the Protein Function in Protein Interaction Networks. - Kire Trivodaliev; Martin Josifoski; Slobodan Kalajdziski (ICT Innovations, 2018)

Cuisine classification using recipe's ingredients. - Slobodan Kalajdziski; Gorjan Radevski; Ilinka Ivanoska; Kire Trivodaliev; Biljana Risteska Stojkoska (MIPRO, 2018)

Real time human activity recognition on smartphones using LSTM networks. - Martin Milenkoski; Kire Trivodaliev; Slobodan Kalajdziski; Mile Jovanov; Biljana Risteska Stojkoska (MIPRO, 2018)

Learning diatom ecological models with fuzzy order data mining algorithm. - Andreja Naumoski; Georgina Mirceva; Kire Trivodaliev; Kosta Mitreski (MIPRO, 2018)

Intelligent analysis of economic parameters of European countries. - Mihail Petkov; Biljana Risteska Stojkoska; Slobodan Kalajdziski; Ilinka Ivanoska; Kire Trivodaliev (MIPRO, 2018)

Internet of Things Solution for Intelligent Air Pollution Prediction and Visualization. - Mladen Korunoski; Biljana Risteska Stojkoska; Kire Trivodaliev (EUROCON, 2019)

Web tool for graph embeddings representation techniques evaluation. - Ilinka Ivanoska; Martin Milenkoski; Slobodan Kalajdziski; Kire Trivodaliev (MIPRO, 2019)

Smart City Air Pollution Monitoring and Prediction: A Case Study of Skopje. - Jovan Kalajdjieski; Mladen Korunoski; Biljana Risteska Stojkoska; Kire Trivodaliev (ICT Innovations, 2020)

Comparative Analysis of Network Embeddings for Functional Annotation in Protein Interaction Networks. - Ilinka Ivanoska; E. Petreska; Biljana Risteska Stojkoska; Slobodan Kalajdziski; Kire Trivodaliev (MIPRO, 2020)

Air Pollution Forecasting Using CNN-LSTM Deep Learning Model. - Lenche Jovova; Kire Trivodaliev (MIPRO, 2021)

An Exploration of Autism Spectrum Disorder Classification from Structural and Functional MRI Images. - Jovan Krajevski; Ilinka Ivanoska; Kire Trivodaliev; Slobodan Kalajdziski; Sonja Gievska (ICT Innovations, 2022)

Multiplex Collaboration Network of the Faculty of Computer Science and Engineering in Skopje. - Ilinka Ivanoska; Kire Trivodaliev; Bojan Ilijoski (ICT Innovations, 2023)

A Complete Air Pollution Monitoring and Prediction Framework. - Jovan Kalajdjieski; Kire Trivodaliev; Georgina Mirceva; Slobodan Kalajdziski; Sonja Gievska (IEEE Access, 2023)

A Survey of Graph Neural Network Architectures in Ligand Binding Affinity Prediction Models. - Fjolla Fetaji; Sonja Gievska; Kire Trivodaliev (MIPRO, 2024)