Simulating association studies: a data-based resampling method for candidate regions or whole genome scans. - Fred A. Wright; Hanwen Huang; Xiaojun Guan; Kevin Gamiel; Clark D. Jeffries; William T. Barry; Fernando Pardo-Manuel de Villena; Patrick F. Sullivan; Kirk C. Wilhelmsen; Fei Zou (Bioinform., 2007)

Data-driven approaches to augment clinical decision in EMR Era. - Ketan K. Mane; Charles Schmitt; Phillips Owen; Kenneth Gersing; Stanley C. Ahalt; Kirk C. Wilhelmsen (CIP, 2012)

ReQON: a Bioconductor package for recalibrating quality scores from next-generation sequencing data. - Christopher R. Cabanski; Keary Cavin; Chris Bizon; Matthew D. Wilkerson; Joel S. Parker; Kirk C. Wilhelmsen; Charles M. Perou; J. S. Marron; D. Neil Hayes (BMC Bioinform., 2012)

Visual Analytics to Optimize Patient-Population Evidence Delivery for Personalized Care. - Ketan K. Mane; Phillips Owen; Charles Schmitt; Kirk C. Wilhelmsen; Kenneth Gersing; Ricardo Pietrobon; Igor Akushevich (BCB, 2013)

MaPSeq, A Service-Oriented Architecture for Genomics Research within an Academic Biomedical Research Institution. - Jason Reilly; Stanley C. Ahalt; John McGee; Phillips Owen; Charles Schmitt; Kirk C. Wilhelmsen (Informatics, 2015)

Projected t-SNE for batch correction. - Emanuele Aliverti; Jeffrey L. Tilson; Dayne L. Filer; Benjamin Babcock; Alejandro Colaneri; Jennifer Ocasio; Timothy R. Gershon; Kirk C. Wilhelmsen; David B. Dunson (Bioinform., 2020)

SMNN: batch effect correction for single-cell RNA-seq data via supervised mutual nearest neighbor detection. - Yuchen Yang; Gang Li 034; Huijun Qian; Kirk C. Wilhelmsen; Yin Shen; Yun Li (Briefings Bioinform., 2021)

Pre-capture multiplexing provides additional power to detect copy number variation in exome sequencing. - Dayne L. Filer; Fengshen Kuo; Alicia T. Brandt; Christian R. Tilley; Piotr A. Mieczkowski; Jonathan S. Berg; Kimberly Robasky; Yun Li; Chris Bizon; Jeffery L. Tilson; Bradford C. Powell; Darius M. Bost; et al. (BMC Bioinform., 2021)