Evaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure prediction. - Kishore J. Doshi; Jamie J. Cannone; Christian W. Cobaugh; Robin Ray Gutell (BMC Bioinform., 2004)

rCAD: A Novel Database Schema for the Comparative Analysis of RNA. - Stuart Ozer; Kishore J. Doshi; Weijia Xu; Robin Ray Gutell (eScience, 2011)

PDZscape: a comprehensive PDZ-protein database. - Kishore J. Doshi; Raja Reddy Kuppili; Siddharth Gurdasani; Navneet Venkatakrishnan; Amit Saxena; Kakoli Bose (BMC Bioinform., 2018)