Extreme Data Science at the National Energy Research Scientific Computing (NERSC) Center. - Sudip S. Dosanjh; Shane Canon; Jack Deslippe; Kjiersten Fagnan; Richard A. Gerber; Lisa Gerhardt; Jason Hick; Douglas Jacobsen; David Skinner; Nicholas J. Wright (PARCO, 2013)

Attacking the opioid epidemic: determining the epistatic and pleiotropic genetic architectures for chronic pain and opioid addiction. - Wayne Joubert; Deborah A. Weighill; David Kainer; Sharlee Climer; Amy Justice; Kjiersten Fagnan; Daniel A. Jacobson (SC, 2018)

Leveraging Ontologies within the National Microbiome Data Collaborative. - William D. Duncan; Faiza Ahmed; Fnu Anubhav; Jeffrey Baumes; Jonathan Beezley; Mark Borkum; Lisa M. Bramer; Shane Canon; Patrick S. G. Chain; Danielle Christianson; Yuri Corilo; Karen Davenport; et al. (ICBO, 2021)

Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale. - Bin Hu 025; Shane Canon; Emiley A. Eloe-Fadrosh; Fnu Anubhav; Michal Babinski; Yuri Corilo; Karen Davenport; William D. Duncan; Kjiersten Fagnan; Mark Flynn; Brian Foster; David Hays; et al. (Frontiers Bioinform., 2021)

Novel Approaches Toward Scalable Composable Workflows in Hyper-Heterogeneous Computing Environments. - Jonathan Bader; Jim Belak; Matthew T. Bement; Matthew Berry; Robert Carson; Daniela Cassol; Stephen Chan; John Coleman; Kastan Day; Alejandro Duque; Kjiersten Fagnan; Jeff Froula; et al. (SC Workshops, 2023)

Automated annotation of scientific texts for ML-based keyphrase extraction and validation. - Oluwamayowa O. Amusat; Harshad Hegde; Christopher J. Mungall; Anna Giannakou; Neil P. Byers; Dan Gunter; Kjiersten Fagnan; Lavanya Ramakrishnan (Database J. Biol. Databases Curation, 2024)