Chapter 22 Describing DNA Automata Using an Artificial Chemistry Based on Pattern Matching and Recombination. - Tooru Watanabe; Keiji Kobayashi; Masaki Nakamura 003; Koji Kishi; Mitsuyoshi Kazuno; Kazuto Tominaga (Recent Advances in Artificial Life, 2005)

A Uniform Framework of Molecular Interaction for an Artificial Chemistry with Compartments. - Tooru Watanabe; Kazumasa Koizumi; Koji Kishi; Masaki Nakamura 003; Keiji Kobayashi; Mitsuyoshi Kazuno; Yoshikazu Suzuki; Yuuki Asada; Kazuto Tominaga (ALIFE, 2007)

Modeling Molecular Computing Systems by an Artificial Chemistry - Its Expressive Power and Application. - Kazuto Tominaga; Tooru Watanabe; Keiji Kobayashi; Masaki Nakamura 003; Koji Kishi; Mitsuyoshi Kazuno (Artif. Life, 2007)

Modeling Biochemical Pathways Using an Artificial Chemistry. - Kazuto Tominaga; Yoshikazu Suzuki; Keiji Kobayashi; Tooru Watanabe; Kazumasa Koizumi; Koji Kishi (Artif. Life, 2009)