ProteinsPlus: interactive analysis of protein-ligand binding interfaces. - Katrin Schöning-Stierand; Konrad Diedrich; Rainer Fährrolfes; Florian Flachsenberg; Agnes Meyder; Eva Nittinger; Ruben Steinegger; Matthias Rarey (Nucleic Acids Res., 2020)

GeoMine: interactive pattern mining of protein-ligand interfaces in the Protein Data Bank. - Konrad Diedrich; Joel Graef; Katrin Schöning-Stierand; Matthias Rarey (Bioinform., 2021)

ProteinsPlus: a comprehensive collection of web-based molecular modeling tools. - Katrin Schöning-Stierand; Konrad Diedrich; Christiane Ehrt; Florian Flachsenberg; Joel Graef; Jochen Sieg; Patrick Penner; Martin Poppinga; Annett Ungethüm; Matthias Rarey (Nucleic Acids Res., 2022)

Database and Workflow Optimizations for Spatial-Geometric Queries in GeoMine. - Martin Poppinga; Joel Graef; Konrad Diedrich; Matthias Rarey; Norbert Ritter (LWDA, 2023)

PoseEdit: enhanced ligand binding mode communication by interactive 2D diagrams. - Konrad Diedrich; Bennet Krause; Ole Berg; Matthias Rarey (J. Comput. Aided Mol. Des., 2023)

User-centric design of a 3D search interface for protein-ligand complexes. - Konrad Diedrich; Christiane Ehrt; Joel Graef; Martin Poppinga; Norbert Ritter; Matthias Rarey (J. Comput. Aided Mol. Des., 2024)