Clustering FunFams using sequence embeddings improves EC purity. - Maria Littmann; Nicola Bordin; Michael Heinzinger; Konstantin Schütze; Christian Dallago; Christine A. Orengo; Burkhard Rost (Bioinform., 2021)

PredictProtein - Predicting Protein Structure and Function for 29 Years. - Michael Bernhofer; Christian Dallago; Timothy Karl; Venkata P. Satagopam; Michael Heinzinger; Maria Littmann; Tobias Olenyi; Jiajun Qiu; Konstantin Schütze; Guy Yachdav; Haim Ashkenazy; Nir Ben-Tal; et al. (Nucleic Acids Res., 2021)

Nearest neighbor search on embeddings rapidly identifies distant protein relations. - Konstantin Schütze; Michael Heinzinger; Martin Steinegger; Burkhard Rost (Frontiers Bioinform., 2022)