The Location of the Gene Regions Under Selective Pressure: Plato Algorithm Parallelization. - Yuri Vyatkin; Konstantin V. Gunbin; Alexey V. Snytnikov; Dmitry A. Afonnikov (PaCT, 2007)

The Evolution of the Hh-Signaling Pathway Genes: A Computer-Assisted Study. - Konstantin V. Gunbin; Dmitry A. Afonnikov; Nikolay A. Kolchanov (Silico Biol., 2007)

Model of the reception of Hedgehog morphogen concentration Gradient: Comparison with an Extended Range of Experimental Data. - Konstantin V. Gunbin; Leonid V. Omelyanchuk; Vladislav V. Kogai; Stanislav I. Fadeev; Nikolay A. Kolchanov (J. Bioinform. Comput. Biol., 2007)

Computer System for Analysis of Molecular Evolution Modes (SAMEM): Analysis of molecular evolution modes at deep inner branches of the phylogenetic tree. - Konstantin V. Gunbin; Valentin V. Suslov; Mikhail A. Genaev; Dmitry A. Afonnikov (Silico Biol., 2012)

Computer and Statistical Analysis of Transcription Factor Binding and Chromatin Modifications by ChIP-seq data in Embryonic Stem Cell. - Yuriy L. Orlov; Han Xu; Dmitry A. Afonnikov; Bing Lim; Jian-Chien Heng; Ping Yuan; Ming Chen 005; Junli Yan; Neil D. Clarke; Nina Orlova; Mikael Huss; Konstantin V. Gunbin; et al. (J. Integr. Bioinform., 2012)

Orthoscape: a cytoscape application for grouping and visualization KEGG based gene networks by taxonomy and homology principles. - Zakhar S. Mustafin; Sergey A. Lashin; Yury G. Matushkin; Konstantin V. Gunbin; Dmitry A. Afonnikov (BMC Bioinform., 2017)