An experimental metagenome data management and analysis system. - Victor M. Markowitz; Natalia Ivanova; Krishna Palaniappan; Ernest Szeto; Frank Korzeniewski; Athanasios Lykidis; Iain Anderson; Konstantinos Mavrommatis; Victor Kunin; Héctor García Martín; Inna Dubchak; Philip Hugenholtz; et al. (ISMB (Supplement of Bioinformatics), 2006)

The integrated microbial genomes (IMG) system. - Victor M. Markowitz; Frank Korzeniewski; Krishna Palaniappan; Ernest Szeto; Greg Werner; Anu Padki; Xueling Zhao; Inna Dubchak; Philip Hugenholtz; Iain Anderson; Athanasios Lykidis; Konstantinos Mavrommatis; et al. (Nucleic Acids Res., 2006)

Annotation of metagenome short reads using proxygenes. - Daniel Dalevi; Natalia Ivanova; Konstantinos Mavrommatis; Sean D. Hooper; Ernest Szeto; Philip Hugenholtz; Nikos Kyrpides; Victor M. Markowitz (ECCB, 2008)

The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata. - Konstantinos Liolios; Konstantinos Mavrommatis; Nektarios Tavernarakis; Nikos Kyrpides (Nucleic Acids Res., 2008)

IMG/M: a data management and analysis system for metagenomes. - Victor M. Markowitz; Natalia Ivanova; Ernest Szeto; Krishna Palaniappan; Ken Chu; Daniel Dalevi; I-Min A. Chen; Yuri Grechkin; Inna Dubchak; Iain Anderson; Athanasios Lykidis; Konstantinos Mavrommatis; et al. (Nucleic Acids Res., 2008)

The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions. - Victor M. Markowitz; Ernest Szeto; Krishna Palaniappan; Yuri Grechkin; Ken Chu; I-Min A. Chen; Inna Dubchak; Iain Anderson; Athanasios Lykidis; Konstantinos Mavrommatis; Natalia Ivanova; Nikos Kyrpides (Nucleic Acids Res., 2008)

IMG ER: a system for microbial genome annotation expert review and curation. - Victor M. Markowitz; Konstantinos Mavrommatis; Natalia Ivanova; I-Min A. Chen; Ken Chu; Nikos Kyrpides (Bioinform., 2009)

Estimating DNA coverage and abundance in metagenomes using a gamma approximation. - Sean D. Hooper; Daniel Dalevi; Amrita Pati; Konstantinos Mavrommatis; Natalia Ivanova; Nikos Kyrpides (Bioinform., 2010)

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata. - Konstantinos Liolios; I-Min A. Chen; Konstantinos Mavrommatis; Nektarios Tavernarakis; Philip Hugenholtz; Victor M. Markowitz; Nikos Kyrpides (Nucleic Acids Res., 2010)

The integrated microbial genomes system: an expanding comparative analysis resource. - Victor M. Markowitz; I-Min A. Chen; Krishna Palaniappan; Ken Chu; Ernest Szeto; Yuri Grechkin; Anna Ratner; Iain Anderson; Athanasios Lykidis; Konstantinos Mavrommatis; Natalia Ivanova; Nikos Kyrpides (Nucleic Acids Res., 2010)

The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools. - Andreas Wilke; Travis Harrison; Jared Wilkening; Dawn Field; Elizabeth M. Glass; Nikos Kyrpides; Konstantinos Mavrommatis; Folker Meyer (BMC Bioinform., 2012)

IMG/M: the integrated metagenome data management and comparative analysis system. - Victor M. Markowitz; I-Min A. Chen; Ken Chu; Ernest Szeto; Krishna Palaniappan; Yuri Grechkin; Anna Ratner; Biju Jacob; Amrita Pati; Marcel Huntemann; Konstantinos Liolios; Ioanna Pagani; et al. (Nucleic Acids Res., 2012)

IMG: the integrated microbial genomes database and comparative analysis system. - Victor M. Markowitz; I-Min A. Chen; Krishna Palaniappan; Ken Chu; Ernest Szeto; Yuri Grechkin; Anna Ratner; Biju Jacob; Jinghua Huang; Peter Williams; Marcel Huntemann; Iain Anderson; et al. (Nucleic Acids Res., 2012)

Accelerating gene context analysis using bitmaps. - Alexandru Romosan; Arie Shoshani; Kesheng Wu; Victor M. Markowitz; Konstantinos Mavrommatis (SSDBM, 2013)

IMG/M 4 version of the integrated metagenome comparative analysis system. - Victor M. Markowitz; I-Min A. Chen; Ken Chu; Ernest Szeto; Krishna Palaniappan; Manoj Pillay; Anna Ratner; Jinghua Huang; Ioanna Pagani; Susannah Tringe; Marcel Huntemann; Konstantinos Billis; et al. (Nucleic Acids Res., 2014)

IMG 4 version of the integrated microbial genomes comparative analysis system. - Victor M. Markowitz; I-Min A. Chen; Krishna Palaniappan; Ken Chu; Ernest Szeto; Manoj Pillay; Anna Ratner; Jinghua Huang; Tanja Woyke; Marcel Huntemann; Iain Anderson; Konstantinos Billis; et al. (Nucleic Acids Res., 2014)

Optimization techniques for the energy efficiency of wireless networks. - Konstantinos Mavrommatis (PCI, 2022)

Confronting and intrusion detection techniques of cyber-attacks in wired and wireless communication networks. - Konstantinos Mavrommatis (PCI, 2022)

pCCI: A machine learning patient-centric cell-cell interactions framework for cancer subtype classification. - Pantelis Papageorgiou; Aigli Korfiati; Aristotelis Misios; Aristidis G. Vrahatis; Alexandros A. Pittis; Bogdan Tanasa; Konstantinos Mavrommatis; Yilin Zhao; Tao Yang; Vassilis Pitsikalis (BIBM, 2023)

A new and innovator method of designing a fiber optic network for the extension of the local area network of a building. - Konstantinos Mavrommatis (PCI, 2024)

A new approach of achieving the safety of railways using fiber optics for data transmission and monitoring. - Konstantinos Mavrommatis (PCI, 2024)