PAL: an object-oriented programming library for molecular evolution and phylogenetics. - Alexei J. Drummond; Korbinian Strimmer (Bioinform., 2001)

TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. - Heiko A. Schmidt; Korbinian Strimmer; Martin Vingron; Arndt von Haeseler (Bioinform., 2002)

A CART-based approach to discover emerging patterns in microarray data. - Anne-Laure Boulesteix; Gerhard Tutz 001; Korbinian Strimmer (Bioinform., 2003)

Modeling gene expression measurement error: a quasi-likelihood approach. - Korbinian Strimmer (BMC Bioinform., 2003)

A Brief Introduction to the Phylogentics Analysis Library V1.5. - Matthew Goode; Korbinian Strimmer; Alexei J. Drummond; Ed Buckler; Allen G. Rodrigo (APBC, 2004)

APE: Analyses of Phylogenetics and Evolution in R language. - Emmanuel Paradis; Julien Claude; Korbinian Strimmer (Bioinform., 2004)

Identifying periodically expressed transcripts in microarray time series data. - Sofia Wichert; Konstantinos Fokianos; Korbinian Strimmer (Bioinform., 2004)

An empirical Bayes approach to inferring large-scale gene association networks. - Juliane Schäfer; Korbinian Strimmer (Bioinform., 2005)

Partial least squares: a versatile tool for the analysis of high-dimensional genomic data. - Anne-Laure Boulesteix; Korbinian Strimmer (Briefings Bioinform., 2007)

Learning causal networks from systems biology time course data: an effective model selection procedure for the vector autoregressive process. - Rainer Opgen-Rhein; Korbinian Strimmer (BMC Bioinform., 2007)

From correlation to causation networks: a simple approximate learning algorithm and its application to high-dimensional plant gene expression data. - Rainer Opgen-Rhein; Korbinian Strimmer (BMC Syst. Biol., 2007)

fdrtool: a versatile R package for estimating local and tail area-based false discovery rates. - Korbinian Strimmer (Bioinform., 2008)

A unified approach to false discovery rate estimation. - Korbinian Strimmer (BMC Bioinform., 2008)

Gene ranking and biomarker discovery under correlation. - Verena Zuber; Korbinian Strimmer (Bioinform., 2009)

A general modular framework for gene set enrichment analysis. - Marit Ackermann; Korbinian Strimmer (BMC Bioinform., 2009)

Entropy Inference and the James-Stein Estimator, with Application to Nonlinear Gene Association Networks. - Jean Hausser; Korbinian Strimmer (J. Mach. Learn. Res., 2009)

Over-optimism in bioinformatics: an illustration. - Monika Jelizarow; Vincent Guillemot; Arthur Tenenhaus; Korbinian Strimmer; Anne-Laure Boulesteix (Bioinform., 2010)

MALDIquant: a versatile R package for the analysis of mass spectrometry data. - Sebastian Gibb; Korbinian Strimmer (Bioinform., 2012)

A novel algorithm for simultaneous SNP selection in high-dimensional genome-wide association studies. - Verena Zuber; A. Pedro Silva; Korbinian Strimmer (BMC Bioinform., 2012)

A simple data-adaptive probabilistic variant calling model. - Steve Hoffmann; Peter F. Stadler; Korbinian Strimmer (Algorithms Mol. Biol., 2015)

Differential protein expression and peak selection in mass spectrometry data by binary discriminant analysis. - Sebastian Gibb; Korbinian Strimmer (Bioinform., 2015)

A whitening approach to probabilistic canonical correlation analysis for omics data integration. - Takoua Jendoubi; Korbinian Strimmer (BMC Bioinform., 2019)