phyC: Clustering cancer evolutionary trees. - Yusuke Matsui; Atsushi Niida; Ryutaro Uchi; Koshi Mimori; Satoru Miyano; Teppei Shimamura (PLoS Comput. Biol., 2017)

Artificial intelligence-assisted drug repurposing via "chemical-induced gene expression ranking". - Takaaki Masuda; Koshi Mimori (Patterns, 2022)