LSI-CAD Programs on Parallel Inference Machine. - Hiroshi Date; Yukinori Matsumoto; Kouichi Kimura; Kazuo Taki; Hiroo Kato; Masahiro Hoshi (FGCS, 1992)

Asymptotic Load Balance of Distributed Hash Tables. - Nobuyuki Ichiyoshi; Kouichi Kimura (FGCS, 1992)

We would like to use Squeak as the instrument for expression! - Kouichi Kimura (C5, 2003)

Computation of Rank and Select Functions on Hierarchical Binary String and Its Application to Genome Mapping Problems for Short-Read DNA Sequences. - Kouichi Kimura; Yutaka Suzuki; Sumio Sugano; Asako Koike (J. Comput. Biol., 2009)

Human Gene and Protein Database (HGPD): a novel database presenting a large quantity of experiment-based results in human proteomics. - Yukio Maruyama; Ai Wakamatsu; Yoshifumi Kawamura; Kouichi Kimura; Jun-ichi Yamamoto; Tetsuo Nishikawa; Yasutomo Kisu; Sumio Sugano; Naoki Goshima; Takao Isogai; Nobuo Nomura (Nucleic Acids Res., 2009)

Seed-Set Construction by Equi-entropy Partitioning for Efficient and Sensitive Short-Read Mapping. - Kouichi Kimura; Asako Koike; Kenta Nakai (WABI, 2011)

A Bit-Parallel Dynamic Programming Algorithm Suitable for DNA Sequence Alignment. - Kouichi Kimura; Asako Koike; Kenta Nakai (J. Bioinform. Comput. Biol., 2012)

Ultrafast SNP analysis using the Burrows-Wheeler transform of short-read data. - Kouichi Kimura; Asako Koike (Bioinform., 2015)

Analysis of genomic rearrangements by using the Burrows-Wheeler transform of short-read data. - Kouichi Kimura; Asako Koike (BMC Bioinform., 2015)

Parallel Computation of the Burrows-Wheeler Transform of Short Reads Using Prefix Parallelism. - Kouichi Kimura; Asako Koike (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)