A graph kernel approach for alignment-free domain-peptide interaction prediction with an application to human SH3 domains. - Kousik Kundu; Fabrizio Costa; Rolf Backofen (Bioinform., 2013)

MoDPepInt: an interactive web server for prediction of modular domain-peptide interactions. - Kousik Kundu; Martin Mann; Fabrizio Costa; Rolf Backofen (Bioinform., 2014)

Cluster based prediction of PDZ-peptide interactions. - Kousik Kundu; Rolf Backofen (BMC Genom., 2014)

In Silico Prediction of Modular Domain-Peptide Interactions - Kousik Kundu (2015)

Freiburg RNA tools: a central online resource for RNA-focused research and teaching. - Martin Raden; Syed M. Ali; Omer S. Alkhnbashi; Anke Busch; Fabrizio Costa; Jason A. Davis; Florian Eggenhofer; Rick Gelhausen; Jens Georg; Steffen Heyne; Michael Hiller; Kousik Kundu; et al. (Nucleic Acids Res., 2018)