Planetary Motion and the Duality of Force Laws. - Rachel Wells Hall; Kresimir Josic (SIAM Rev., 2000)

The Mathematics of Musical Instruments. - Rachel Wells Hall; Kresimir Josic (Am. Math. Mon., 2001)

Singular Perturbations of Quadratic Maps. - Robert L. Devaney; Kresimir Josic; Yakov Shapiro (Int. J. Bifurc. Chaos, 2004)

Playing Catch-up with Iterated Exponentials. - Robert L. Devaney; Kresimir Josic; Mónica Moreno Rocha; Pradipta Seal; Yakov Shapiro; Alex T. Frumosu (Am. Math. Mon., 2004)

Deriving Information about Architecture from Activity Patterns in Coupled Cell Systems. - Kresimir Josic; Jonathan E. Rubin (SIAM J. Appl. Dyn. Syst., 2005)

Winding Numbers and Average Frequencies in Phase Oscillator Networks. - Martin Golubitsky; Kresimir Josic; Eric Shea-Brown (J. Nonlinear Sci., 2006)

Isochron. - Kresimir Josic; Eric Shea-Brown; Jeff Moehlis (Scholarpedia, 2006)

Periodic orbit. - Jeff Moehlis; Kresimir Josic; Eric Shea-Brown (Scholarpedia, 2006)

Branching dendrites with resonant membrane: a "sum-over-trips" approach. - Stephen Coombes; Yulia Timofeeva; Carl-Magnus Svensson; Gabriel J. Lord; Kresimir Josic; Steven J. Cox; C. M. Colbert (Biol. Cybern., 2007)

The Firing of an Excitable Neuron in the Presence of Stochastic Trains of Strong Synaptic Inputs. - Jonathan E. Rubin; Kresimir Josic (Neural Comput., 2007)

'Genome order index' should not be used for defining compositional constraints in nucleotide sequences. - Eran Elhaik; Dan Graur; Kresimir Josic (Comput. Biol. Chem., 2008)

Learning by structural remodeling in a class of single cell models. - Keith J. Kelleher; V. Hajdik; C. M. Colbert; Kresimir Josic (J. Comput. Neurosci., 2008)

Democratization in a passive dendritic tree: an analytical investigation. - Yulia Timofeeva; Steven J. Cox; Stephen Coombes; Kresimir Josic (J. Comput. Neurosci., 2008)

Unstable Solutions of Nonautonomous Linear Differential Equations. - Kresimir Josic; Robert Rosenbaum (SIAM Rev., 2008)

Improved community structure detection using a modified fine tuning strategy - Yudong Sun; Bogdan Danila; Kresimir Josic; Kevin E. Bassler (CoRR, 2009)

A finite volume method for stochastic integrate-and-fire models. - Fabien Marpeau; Aditya Barua; Kresimir Josic (J. Comput. Neurosci., 2009)

Stimulus-Dependent Correlations and Population Codes. - Kresimir Josic; Eric Shea-Brown; Brent Doiron; Jaime de la Rocha (Neural Comput., 2009)

Pooling and correlated neural activity. - Robert Rosenbaum; James Trousdale; Kresimir Josic (Frontiers Comput. Neurosci., 2010)

Mechanisms That Modulate the Transfer of Spiking Correlations. - Robert Rosenbaum; Kresimir Josic (Neural Comput., 2011)

Stochastic Delay Accelerates Signaling in Gene Networks. - Kresimir Josic; José Manuel López; William Ott; LieJune Shiau; Matthew R. Bennett (PLoS Comput. Biol., 2011)

Fast Spatiotemporal Smoothing of Calcium Measurements in Dendritic Trees. - Eftychios A. Pnevmatikakis; Keith J. Kelleher; Rebecca Chen; Petter Saggau; Kresimir Josic; Liam Paninski (PLoS Comput. Biol., 2012)

Impact of Network Structure and Cellular Response on Spike Time Correlations. - James Trousdale; Yu Hu; Eric Shea-Brown; Kresimir Josic (PLoS Comput. Biol., 2012)

A generative spike train model with time-structured higher order correlations. - James Trousdale; Yu Hu; Eric Shea-Brown; Kresimir Josic (Frontiers Comput. Neurosci., 2013)

Encoding certainty in bump attractors. - Samuel Carroll; Kresimir Josic; Zachary P. Kilpatrick (J. Comput. Neurosci., 2014)

The relationship between stochastic and deterministic quasi-steady state approximations. - Jae Kyoung Kim; Kresimir Josic; Matthew R. Bennett (BMC Syst. Biol., 2015)

Networks that learn the precise timing of event sequences. - Alan Veliz-Cuba; Harel Z. Shouval; Kresimir Josic; Zachary P. Kilpatrick (J. Comput. Neurosci., 2015)

Visual Decisions in the Presence of Measurement and Stimulus Correlations. - Manisha Bhardwaj; Samuel Carroll; Wei Ji Ma; Kresimir Josic (Neural Comput., 2015)

Timing and Variability of Galactose Metabolic Gene Activation Depend on the Rate of Environmental Change. - Truong D. Nguyen-Huu; Chinmaya Gupta; Bo Ma; William Ott; Kresimir Josic; Matthew R. Bennett (PLoS Comput. Biol., 2015)

Sources of Variability in a Synthetic Gene Oscillator. - Alan Veliz-Cuba; Andrew J. Hirning; Adam A. Atanas; Faiza Hussain; Flavia Vancia; Kresimir Josic; Matthew R. Bennett (PLoS Comput. Biol., 2015)

Improved Estimation and Interpretation of Correlations in Neural Circuits. - Dimitri Yatsenko; Kresimir Josic; Alexander S. Ecker; Emmanouil Froudarakis; R. James Cotton; Andreas S. Tolias (PLoS Comput. Biol., 2015)

Stochastic Models of Evidence Accumulation in Changing Environments. - Alan Veliz-Cuba; Zachary P. Kilpatrick; Kresimir Josic (SIAM Rev., 2016)

Evidence Accumulation and Change Rate Inference in Dynamic Environments. - Adrian E. Radillo; Alan Veliz-Cuba; Kresimir Josic; Zachary P. Kilpatrick (Neural Comput., 2017)

Linking structure and activity in nonlinear spiking networks. - Gabriel Koch Ocker; Kresimir Josic; Eric Shea-Brown; Michael A. Buice (PLoS Comput. Biol., 2017)

Bistability and oscillations in co-repressive synthetic microbial consortia. - Mehdi Sadeghpour; Alan Veliz-Cuba; Gábor Orosz; Kresimir Josic; Matthew R. Bennett (Quant. Biol., 2017)

Loss of information in feedforward social networks. - Simon Stolarczyk; Manisha Bhardwaj; Kevin E. Bassler; Wei Ji Ma; Kresimir Josic (J. Complex Networks, 2018)

Optimal Evidence Accumulation on Social Networks. - Bhargav R. Karamched; Simon Stolarczyk; Zachary P. Kilpatrick; Kresimir Josic (CoRR, 2018)

Analyzing dynamic decision-making models using Chapman-Kolmogorov equations. - Nicholas W. Barendregt; Kresimir Josic; Zachary P. Kilpatrick (J. Comput. Neurosci., 2019)

Bayesian inference of distributed time delay in transcriptional and translational regulation. - Boseung Choi; Yu-Yu Cheng; Selahattin Cinar; William Ott; Matthew R. Bennett; Kresimir Josic; Jae Kyoung Kim (Bioinform., 2020)

A hierarchical model of perceptual multistability involving interocular grouping. - Yunjiao Wang; Zachary P. Kilpatrick; Kresimir Josic (J. Comput. Neurosci., 2020)

Bayesian Evidence Accumulation on Social Networks. - Bhargav R. Karamched; Simon Stolarczyk; Zachary P. Kilpatrick; Kresimir Josic (SIAM J. Appl. Dyn. Syst., 2020)

Hierarchical Bayesian models of transcriptional and translational regulation processes with delays. - Mark Jayson Cortez; Hyukpyo Hong; Boseung Choi; Jae Kyoung Kim; Kresimir Josic (Bioinform., 2021)

Stochastic Neural Networks for Automatic Cell Tracking in Microscopy Image Sequences of Bacterial Colonies. - Sorena Sarmadi; James J. Winkle; Razan N. Alnahhas; Matthew R. Bennett; Kresimir Josic; Andreas Mang; Robert Azencott (CoRR, 2021)

Balanced networks under spike-time dependent plasticity. - Alan Eric Akil; Robert Rosenbaum; Kresimir Josic (PLoS Comput. Biol., 2021)

Emergent spatiotemporal population dynamics with cell-length control of synthetic microbial consortia. - James J. Winkle; Bhargav R. Karamched; Matthew R. Bennett; William Ott; Kresimir Josic (PLoS Comput. Biol., 2021)

Suboptimal human inference can invert the bias-variance trade-off for decisions with asymmetric evidence. - Tahra L. Eissa; Joshua I. Gold; Kresimir Josic; Zachary P. Kilpatrick (PLoS Comput. Biol., 2022)

Inferring delays in partially observed gene regulation processes. - Hyukpyo Hong; Mark Jayson Cortez; Yu-Yu Cheng; Hang Joon Kim; Boseung Choi; Kresimir Josic; Jae Kyoung Kim (Bioinform., 2023)

Incorporating Computational Challenges into a Multidisciplinary Course on Stochastic Processes. - Mark Jayson Cortez; Alan Eric Akil; Kresimir Josic; Alexander J. Stewart (SIAM Rev., 2023)

Information-Seeking Decision Strategies Mitigate Risk in Dynamic, Uncertain Environments. - Nicholas W. Barendregt; Joshua I. Gold; Kresimir Josic; Zachary P. Kilpatrick (CoRR, 2025)

Neural Network-Based Parameter Estimation for Non-Autonomous Differential Equations with Discontinuous Signals. - Hyeontae Jo; Kresimir Josic; Jae Kyoung Kim (CoRR, 2025)