Characterization and Comparison of Embedding Algorithms for Phenotyping across a Network of Observational Databases. - Chao Pang; Ruijun Chen; Harry Reyes Nieva; Krishna Kalluri; Tony Sun; Xinzhuo Jiang; Victor Alfonso Rodriguez; Patrick B. Ryan; Karthik Natarajan (AMIA, 2020)

Phenotype Concept Set Construction from Concept Pair Likelihoods. - Victor Alfonso Rodriguez; Tony Sun; Phyllis Thangaraj; Chao Pang; Krishna Kalluri; Xinzhuo Jiang; Karthik Natarajan; Patrick B. Ryan; Anna Ostropolets; Ruijun Chen (AMIA, 2020)

CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks. - Chao Pang; Xinzhuo Jiang; Krishna S. Kalluri; Matthew E. Spotnitz; Ruijun Chen; Adler J. Perotte; Karthik Natarajan (ML4H@NeurIPS, 2021)

CEHR-GPT: Generating Electronic Health Records with Chronological Patient Timelines. - Chao Pang; Xinzhuo Jiang; Nishanth Parameshwar Pavinkurve; Krishna S. Kalluri; Elise L. Minto; Jason Patterson; Linying Zhang; George Hripcsak; Noémie Elhadad; Karthik Natarajan (CoRR, 2024)