NAViGaTOR: Large Scalable and Interactive Navigation and Analysis of Large Graphs. - Amira Djebbari; Muhammad Ali; David Otasek; Max Kotlyar; Kristen Fortney; Serene Wong; Anthony Hrvojic; Igor Jurisica (Internet Math., 2011)

Computational Advantages of Reverberating Loops for Sensorimotor Learning. - Kristen Fortney; Douglas B. Tweed (Neural Comput., 2012)

NetwoRx: connecting drugs to networks and phenotypes in Saccharomyces cerevisiae. - Kristen Fortney; Wing Xie; Max Kotlyar; Joshua Griesman; Yulia Kotseruba; Igor Jurisica (Nucleic Acids Res., 2013)

Visual Data Mining of Biological Networks: One Size Does Not Fit All. - Chiara Pastrello; David Otasek; Kristen Fortney; Giuseppe Agapito; Mario Cannataro; Elize Shirdel; Igor Jurisica (PLoS Comput. Biol., 2013)

Prioritizing Therapeutics for Lung Cancer: An Integrative Meta-analysis of Cancer Gene Signatures and Chemogenomic Data. - Kristen Fortney; Joshua Griesman; Max Kotlyar; Chiara Pastrello; Marc Angeli; Ming-Sound Tsao; Igor Jurisica (PLoS Comput. Biol., 2015)

PAIRUP-MS: Pathway analysis and imputation to relate unknowns in profiles from mass spectrometry-based metabolite data. - Yuan-Hao Hsu; Claire Churchhouse; Tune H. Pers; Josep M. Mercader; Andres Metspalu; Krista Fischer; Kristen Fortney; Eric K. Morgen; Clicerio Gonzalez; Maria E. Gonzalez; Tõnu Esko; Joel Hirschhorn (PLoS Comput. Biol., 2019)