CRBHits: From Conditional Reciprocal Best Hits to Codon Alignments and Ka/Ks in R. - Kristian K. Ullrich (J. Open Source Softw., 2020)

Dedicated transcriptomics combined with power analysis lead to functional understanding of genes with weak phenotypic changes in knockout lines. - Chen Xie; Cemalettin Bekpen; Sven Künzel; Maryam Keshavarz; Rebecca Krebs-Wheaton; Neva Skrabar; Kristian K. Ullrich; Wenyu Zhang; Diethard Tautz (PLoS Comput. Biol., 2020)

syntenet: an R/Bioconductor package for the inference and analysis of synteny networks. - Fabricio Almeida-Silva; Tao Zhao; Kristian K. Ullrich; M. Eric Schranz; Yves Van de Peer (Bioinform., 2023)

oggmap: a Python package to extract gene ages per orthogroup and link them with single-cell RNA data. - Kristian K. Ullrich; Nikoleta E. Glynatsi (Bioinform., 2023)