GenMAPP 2: new features and resources for pathway analysis. - Nathan Salomonis; Kristina Hanspers; Alexander C. Zambon; Karen Vranizan; Steven C. Lawlor; Kam D. Dahlquist; Scott Doniger; Joshua M. Stuart; Bruce R. Conklin; Alexander R. Pico (BMC Bioinform., 2007)

Presenting and exploring biological pathways with PathVisio. - Martijn P. van Iersel; Thomas Kelder; Alexander R. Pico; Kristina Hanspers; Susan L. Coort; Bruce R. Conklin; Chris T. A. Evelo (BMC Bioinform., 2008)

Alternative Splicing in the Differentiation of Human Embryonic Stem Cells into Cardiac Precursors. - Nathan Salomonis; Brandon Nelson; Karen Vranizan; Alexander R. Pico; Kristina Hanspers; Allan Kuchinsky; Linda Ta; Mark Mercola; Bruce R. Conklin (PLoS Comput. Biol., 2009)

The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services. - Martijn P. van Iersel; Alexander R. Pico; Thomas Kelder; Jianjiong Gao; Isaac Ho; Kristina Hanspers; Bruce R. Conklin; Chris T. A. Evelo (BMC Bioinform., 2010)

GO-Elite: a flexible solution for pathway and ontology over-representation. - Alexander C. Zambon; Stan Gaj; Isaac Ho; Kristina Hanspers; Karen Vranizan; Chris T. A. Evelo; Bruce R. Conklin; Alexander R. Pico; Nathan Salomonis (Bioinform., 2012)

Mosaic: making biological sense of complex networks. - Chao Zhang 032; Kristina Hanspers; Allan Kuchinsky; Nathan Salomonis; Dong Xu 002; Alexander R. Pico (Bioinform., 2012)

WikiPathways: building research communities on biological pathways. - Thomas Kelder; Martijn P. van Iersel; Kristina Hanspers; Martina Kutmon; Bruce R. Conklin; Chris T. A. Evelo; Alexander R. Pico (Nucleic Acids Res., 2012)

NOA: a cytoscape plugin for network ontology analysis. - Chao Zhang 032; Jiguang Wang; Kristina Hanspers; Dong Xu 002; Luonan Chen; Alexander R. Pico (Bioinform., 2013)

WikiPathways: capturing the full diversity of pathway knowledge. - Martina Kutmon; Anders Riutta; Nuno Nunes 002; Kristina Hanspers; Egon L. Willighagen; Anwesha Bohler; Jonathan Mélius; Andra Waagmeester; Sravanthi R. Sinha; Ryan A. Miller; Susan L. Coort; Elisa Cirillo; et al. (Nucleic Acids Res., 2016)

Reactome from a WikiPathways Perspective. - Anwesha Bohler; Guanming Wu; Martina Kutmon; Leontius Adhika Pradhana; Susan L. Coort; Kristina Hanspers; Robin Haw; Alexander R. Pico; Chris T. A. Evelo (PLoS Comput. Biol., 2016)

WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research. - Denise N. Slenter; Martina Kutmon; Kristina Hanspers; Anders Riutta; Jacob Windsor; Nuno Nunes 002; Jonathan Mélius; Elisa Cirillo; Susan L. Coort; Daniela Digles; Friederike Ehrhart; Pieter Giesbertz; et al. (Nucleic Acids Res., 2018)

WikiPathways: connecting communities. - Marvin Martens; Ammar Ammar; Anders Riutta; Andra Waagmeester; Denise N. Slenter; Kristina Hanspers; Ryan A. Miller; Daniela Digles; Elisson N. Lopes; Friederike Ehrhart; Lauren J. Dupuis; Laurent A. Winckers; et al. (Nucleic Acids Res., 2021)

Ten simple rules for creating reusable pathway models for computational analysis and visualization. - Kristina Hanspers; Martina Kutmon; Susan L. Coort; Daniela Digles; Lauren J. Dupuis; Friederike Ehrhart; Finterly Hu; Elisson N. Lopes; Marvin Martens; Nhung Pham; Woosub Shin; Denise N. Slenter; et al. (PLoS Comput. Biol., 2021)

BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs. - Jackson Callaghan; Colleen H. Xu; Jiwen Xin; Marco Alvarado Cano; Anders Riutta; Eric Zhou; Rohan Juneja; Yao Yao 007; Madhumita Narayan; Kristina Hanspers; Ayushi Agrawal; Alexander R. Pico; et al. (Bioinform., 2023)