ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data. - Milana Frenkel-Morgenstern; Alessandro Gorohovski; Vincent Lacroix; Mark F. Rogers; Kristina Ibáñez; Cesar Boullosa; Eduardo Andrés León; Asa Ben-Hur; Alfonso Valencia (Nucleic Acids Res., 2013)

A computational approach inspired by simulated annealing to study the stability of protein interaction networks in cancer and neurological disorders. - Kristina Ibáñez; María Guijarro; Gonzalo Pajares; Alfonso Valencia (Data Min. Knowl. Discov., 2016)

ExpansionHunter: a sequence-graph-based tool to analyze variation in short tandem repeat regions. - Egor Dolzhenko; Viraj Deshpande; Felix Schlesinger; Peter Krusche; Roman Petrovski; Sai Chen; Dorothea Emig-Agius; Andrew Gross; Giuseppe Narzisi; Brett Bowman; Konrad Scheffler; Joke J. F. A van Vugt; et al. (Bioinform., 2019)