O-GLYCBASE version 2.0: a revised database of O-glycosylated proteins. - Jan E. Hansen; Ole Lund; Kristoffer Rapacki; Søren Brunak (Nucleic Acids Res., 1997)

O-GLYCBASE Version 3.0: a revised database of O-glycosylated proteins. - Jan E. Hansen; Ole Lund; Jette Nilsson; Kristoffer Rapacki; Søren Brunak (Nucleic Acids Res., 1998)

O-GLYCBASE version 4.0: a revised database of O-glycosylated proteins. - Ramneek Gupta; Hanne Birch; Kristoffer Rapacki; Søren Brunak; Jan E. Hansen (Nucleic Acids Res., 1999)

NESbase version 1.0: a database of nuclear export signals. - Tanja la Cour; Ramneek Gupta; Kristoffer Rapacki; Karen Skriver; Flemming M. Poulsen; Søren Brunak (Nucleic Acids Res., 2003)

FeatureMap3D - a tool to map protein features and sequence conservation onto homologous structures in the PDB. - Rasmus Wernersson; Kristoffer Rapacki; Hans Henrik Stærfeldt; Peter Wad Sackett; Anne Mølgaard (Nucleic Acids Res., 2006)

BioXSD: the common data-exchange format for everyday bioinformatics web services. - Matús Kalas; Pål Puntervoll; Alexandre Joseph; Edita Bartaseviciute; Armin Töpfer; Prabakar Venkataraman; Steve Pettifer; Jan Christian Bryne; Jon C. Ison; Christophe Blanchet; Kristoffer Rapacki; Inge Jonassen (Bioinform., 2010)

The EMBRACE web service collection. - Steve Pettifer; Jon C. Ison; Matús Kalas; Dave Thorne; Philip McDermott; Inge Jonassen; Ali Liaquat; José María Fernández 001; José Manuel Rodriguez; David G. Pisano; Christophe Blanchet; Mahmut Uludag; et al. (Nucleic Acids Res., 2010)

Tools and data services registry: a community effort to document bioinformatics resources. - Jon C. Ison; Kristoffer Rapacki; Hervé Ménager; Matús Kalas; Emil Rydza; Piotr Chmura; Christian Anthon; Niall Beard; Karel Berka; Dan M. Bolser; Tim Booth; Anthony Bretaudeau; et al. (Nucleic Acids Res., 2016)

Using registries to integrate bioinformatics tools and services into workbench environments. - Hervé Ménager; Matús Kalas; Kristoffer Rapacki; Jon C. Ison (Int. J. Softw. Tools Technol. Transf., 2016)