Parallel Implementation of Logical Analysis of Data (LAD) for Discriminatory Analysis of Protein Mass Spectrometry Data. - Krzysztof Puszynski (PPAM, 2005)

Single TNFalpha trimers mediating NF-kappaB activation: stochastic robustness of NF-kappaB signaling. - Tomasz Lipniacki; Krzysztof Puszynski; Pawel Paszek; Allan R. Brasier; Marek Kimmel (BMC Bioinform., 2007)

Application of Image Processing Algorithms in Proteomics: Automatic Analysis of 2-D Gel Electrophoresis Images from Western Blot Assay. - Katarzyna Jonak; Karol Jedrasiak; Andrzej Polanski; Krzysztof Puszynski (ICCVG, 2012)

Regulation of p53 by siRNA in radiation treated cells: Simulation studies. - Krzysztof Puszynski; Roman Jaksik; Andrzej Swierniak (Int. J. Appl. Math. Comput. Sci., 2012)

Analysis of ATM signaling pathway as an activator of p53 and NF-kB regulatory modules and the role of PPM1D. - Krzysztof Puszynski; Katarzyna Jonak; Monika Kurpas; Patryk Janus; Katarzyna Szoltysek (IWBBIO, 2014)

The Pharmacodynamics of the p53-Mdm2 Targeting Drug Nutlin: The Role of Gene-Switching Noise. - Krzysztof Puszynski; Alberto Gandolfi; Alberto d'Onofrio (PLoS Comput. Biol., 2014)

The Resection Mechanism Promotes Cell Survival After Exposure to IR. - Monika Kurpas; Katarzyna Jonak; Krzysztof Puszynski (ICMMI, 2015)

Reachability of the Therapeutic Target in the Systems with Parameters Switch. - Magdalena Ochab; Krzysztof Puszynski; Andrzej Swierniak (IWBBIO, 2016)

Structural stability of biological models with switchings. - Magdalena Ochab; Krzysztof Puszynski; Andrzej Swierniak (MMAR, 2016)

A novel mathematical model of ATM/p53/NF- κB pathways points to the importance of the DDR switch-off mechanisms. - Katarzyna Jonak; Monika Kurpas; Katarzyna Szoltysek; Patryk Janus; Agata Abramowicz; Krzysztof Puszynski (BMC Syst. Biol., 2016)

Erratum to: A novel mathematical model of ATM/p53/NF-κB pathways points to the importance of the DDR switch-off mechanisms. - Katarzyna Jonak; Monika Kurpas; Katarzyna Szoltysek; Patryk Janus; Agata Abramowicz; Krzysztof Puszynski (BMC Syst. Biol., 2016)

Variety Behavior in the Piece-Wise Linear Model of the p53-Regulatory Module. - Magdalena Ochab; Krzysztof Puszynski; Andrzej Swierniak; Jerzy Klamka (IWBBIO (1), 2017)

Apoptotic Regulatory Module as Switched Control System - Analysis of Asymptotic Properties. - Magdalena Ochab; Andrzej Swierniak; Jerzy Klamka; Krzysztof Puszynski (BIOINFORMATICS, 2018)

Nucleotide composition bias in high throughput gene expression measurement methods. - Roman Jaksik; Anna Lalik; Krzysztof Puszynski (ICSPCS, 2019)

Analysis of factors affecting the precision of gene expression measurement methods. - Anna Lalik; Krzysztof Puszynski; Roman Jaksik (ICSPCS, 2019)

Correction of the genes expression measurements based on the probes design features. - Krzysztof Puszynski; Anna Lalik; Roman Jaksik (ICSPCS, 2019)

Influence of the Stochasticity in the Model on the Certain Drugs Pharmacodynamics. - Krzysztof Puszynski (IWBBIO (1), 2019)

Influence of the Number of Thresholds on the Dynamics of Models with Switchings of the Biological Systems. - Magdalena Ochab; Krzysztof Puszynski (KKA, 2020)

PDDL optimal planning as the Linear Programming Problem in a seaport container terminal. - Daniel Wójtowicz; Krzysztof Puszynski; Adam Galuszka (MMAR, 2024)