ATLAS (Automatic Tool for Local Assembly Structures) - a comprehensive infrastructure for assembly, annotation, and genomic binning of metagenomic and metatranscriptomic data. - Richard Allen White III; Joseph Brown; Sean Colby; Christopher C. Overall; Joon-Yong Lee; Jeremy Zucker; Kurt R. Glaesemann; Christer Jansson; Janet K. Jansson (PeerJ Prepr., 2017)

MerCat: a versatile k-mer counter and diversity estimator for database-independent property analysis obtained from metagenomic and/or metatranscriptomic sequencing data. - Richard Allen White III; Ajay Panyala; Kevin Glass; Sean Colby; Kurt R. Glaesemann; Christer Jansson; Janet K. Jansson (PeerJ Prepr., 2017)