EMPAware: Analyzing Changes in User Perceptions of Mobile Privacy on iOS with Enhanced Awareness. - Brian Krupp; Emily Timko; Kyle Cox; William Hicks; Malik Bursey; Christopher Banfield (IWSPA@CODASPY, 2021)

Thought Graph: Generating Thought Process for Biological Reasoning. - Chi-Yang Hsu; Kyle Cox; Jiawei Xu 006; Zhen Tan 001; Tianhua Zhai; Mengzhou Hu; Dexter Pratt; Tianlong Chen 001; Ziniu Hu; Ying Ding 001 (WWW (Companion Volume), 2024)

Mapping from Meaning: Addressing the Miscalibration of Prompt-Sensitive Language Models. - Kyle Cox; Jiawei Xu 006; Yikun Han; Rong Xu; Tianhao Li; Chi-Yang Hsu; Tianlong Chen 001; Walter Gerych; Ying Ding 001 (AAAI, 2025)

Thought Graph: Balancing Specificity and Uncertainty in LLM-Based Gene Set Annotation. - Kyle Cox; Gang Qu; Chi-Yang Hsu; Jiawei Xu 006; Yingtong Zhou; Zhen Tan 001; Mengzhou Hu; Tianlong Chen 001; Ziniu Hu; Zhongming Zhao; Ying Ding 001 (ICHI, 2025)