Formal Translation Directed by Parallel LLP Parsing. - Ladislav Vagner; Borivoj Melichar (SOFSEM (1), 2007)

The Constrained Longest Common Subsequence Problem for Degenerate Strings. - Costas S. Iliopoulos; M. Sohel Rahman; Michal Vorácek; Ladislav Vagner (CIAA, 2007)

Parallel LL parsing. - Ladislav Vagner; Borivoj Melichar (Acta Informatica, 2007)

Indexing Factors in DNA/RNA Sequences. - Tomás Flouri; Costas S. Iliopoulos; Mohammad Sohel Rahman; Ladislav Vagner; Michal Vorácek (BIRD, 2008)

Finite automata based algorithms on subsequences and supersequences of degenerate strings. - Costas S. Iliopoulos; M. Sohel Rahman; Michal Vorácek; Ladislav Vagner (J. Discrete Algorithms, 2010)