Fast and Memory-Efficient Significant Pattern Mining via Permutation Testing. - Felipe Llinares-López; Mahito Sugiyama; Laetitia Papaxanthos; Karsten M. Borgwardt (KDD, 2015)

Searching for significant patterns in stratified data. - Felipe Llinares-López; Laetitia Papaxanthos; Dean A. Bodenham; Karsten M. Borgwardt (CoRR, 2015)

Finding significant combinations of features in the presence of categorical covariates. - Laetitia Papaxanthos; Felipe Llinares-López; Dean A. Bodenham; Karsten M. Borgwardt (NIPS, 2016)

Genome-wide genetic heterogeneity discovery with categorical covariates. - Felipe Llinares-López; Laetitia Papaxanthos; Dean A. Bodenham; Damian Roqueiro; COPDGene Investigators; Karsten M. Borgwardt (Bioinform., 2017)

Inferring Concept Hierarchies from Text Corpora via Hyperbolic Embeddings. - Matt Le 001; Stephen Roller; Laetitia Papaxanthos; Douwe Kiela; Maximilian Nickel (ACL (1), 2019)

CASMAP: detection of statistically significant combinations of SNPs in association mapping. - Felipe Llinares-López; Laetitia Papaxanthos; Damian Roqueiro; Dean A. Bodenham; Karsten M. Borgwardt (Bioinform., 2019)

Machine Learning for Interaction Discovery in Genetics and Bioengineering. - Laetitia Papaxanthos (2020)

JKOnet: Proximal Optimal Transport Modeling of Population Dynamics. - Charlotte Bunne; Laetitia Meng-Papaxanthos; Andreas Krause 001; Marco Cuturi (CoRR, 2021)

Proximal Optimal Transport Modeling of Population Dynamics. - Charlotte Bunne; Laetitia Papaxanthos; Andreas Krause 001; Marco Cuturi (AISTATS, 2022)

Semi-supervised Single-Cell Cross-modality Translation Using Polarbear. - Ran Zhang; Laetitia Meng-Papaxanthos; Jean-Philippe Vert; William Stafford Noble (RECOMB, 2022)

Conditional generative modeling for de novo protein design with hierarchical functions. - Tim Kucera; Matteo Togninalli; Laetitia Meng-Papaxanthos (Bioinform., 2022)

Optimal Transport Tools (OTT): A JAX Toolbox for all things Wasserstein. - Marco Cuturi; Laetitia Meng-Papaxanthos; Yingtao Tian; Charlotte Bunne; Geoff Davis; Olivier Teboul (CoRR, 2022)

Multimodal Single-Cell Translation and Alignment with Semi-Supervised Learning. - Ran Zhang; Laetitia Meng-Papaxanthos; Jean-Philippe Vert; William Stafford Noble (J. Comput. Biol., 2022)

Software for Large Scale MMD-MA. - Laetitia Meng-Papaxanthos; Ran Zhang; Gang Li 034; Marco Cuturi; William Stafford Noble; Jean-Philippe Vert (Zenodo, 2022)