Predicting DNA Methylation States with Hybrid Information Based Deep-Learning Model. - Laiyi Fu; Qinke Peng; Ling Chai (IEEE ACM Trans. Comput. Biol. Bioinform., 2020)

SAILER: scalable and accurate invariant representation learning for single-cell ATAC-seq processing and integration. - Yingxin Cao; Laiyi Fu; Jie Wu; Qinke Peng; Qing Nie; Jing Zhang; Xiaohui Xie (Bioinform., 2021)

Design and Application of a Non-wrapped Programmable Logic Controller (PLC) Laboratory Kit for Automatic Control Education. - Ying Wang 065; Xiaodong Ren; Zhou Jing; Meilan Liu; Qinke Peng; Laiyi Fu (ITHET, 2022)

LncDLSM: Identification of Long Non-Coding RNAs With Deep Learning-Based Sequence Model. - Ying Wang 065; Pengfei Zhao; Hongkai Du; Yingxin Cao; Qinke Peng; Laiyi Fu (IEEE J. Biomed. Health Informatics, 2023)

KGETCDA: an efficient representation learning framework based on knowledge graph encoder from transformer for predicting circRNA-disease associations. - Jinyang Wu 001; Zhiwei Ning; Yidong Ding; Ying Wang 065; Qinke Peng; Laiyi Fu (Briefings Bioinform., 2023)

BertNDA: A Model Based on Graph-Bert and Multi-Scale Information Fusion for ncRNA-Disease Association Prediction. - Zhiwei Ning; Jinyang Wu 001; Yidong Ding; Ying Wang 065; Qinke Peng; Laiyi Fu (IEEE J. Biomed. Health Informatics, 2023)

User Linguistic Style Awareness and Interest-Driven Conversational Recommender Systems. - Hongkai Du; Haozhou Li; Qinke Peng; Laiyi Fu (DTPI, 2024)

ACLNDA: an asymmetric graph contrastive learning framework for predicting noncoding RNA-disease associations in heterogeneous graphs. - Laiyi Fu; Zhiyuan Yao; Yangyi Zhou; Qinke Peng; Hongqiang Lyu (Briefings Bioinform., 2024)

Progressive enhancement and restoration for mural images under low-light and defected conditions based on multi-receptive field strategy. - Xiameng Wei; Binbin Fan; Ying Wang 065; Yanxiang Feng; Laiyi Fu (CoRR, 2024)

A Role-specific Guided Large Language Model for Ophthalmic Consultation Based on Stylistic Differentiation. - Laiyi Fu; Binbin Fan; Hongkai Du; Yanxiang Feng; Chunhua Li; Huping Song (CoRR, 2024)

KGRACDA: A Model Based on Knowledge Graph from Recursion and Attention Aggregation for CircRNA-Disease Association Prediction. - Ying Wang 065; Maoyuan Ma; Yanxin Xie; Qinke Peng; Hongqiang Lyu; Hequan Sun; Laiyi Fu (IEEE ACM Trans. Comput. Biol. Bioinform., 2024)

Dual balanced augmented topological noncoding RNA disease triplet association in heterogeneous graphs. - Laiyi Fu; Yangyi Zhou; Hongqiang Lyu; Hequan Sun (Briefings Bioinform., 2025)

DeepExDC interprets genomic compartmentalization changes in single-cell Hi-C data. - Hongqiang Lyu; Pei Cao; Wenyao Long; Xiaoran Yin; Shengjun Xu; Laiyi Fu (Briefings Bioinform., 2025)

Parallel Seeds: From Foundation Models to Foundation Intelligence for Agricultural Sustainability. - Laiyi Fu; Shunkang Ling; Danyang Wu; Mengzhen Kang; Fei-Yue Wang 001; Hequan Sun (IEEE CAA J. Autom. Sinica, 2025)