Sparse control of force field dynamics. - Mattia Bongini; Massimo Fornasier; Fabian Frcohlich; Laleh Haghverdi (NetGCooP, 2014)

Diffusion maps for high-dimensional single-cell analysis of differentiation data. - Laleh Haghverdi; Florian Buettner 002; Fabian J. Theis (Bioinform., 2015)

Reconstructing gene regulatory dynamics from high-dimensional single-cell snapshot data. - Andrea Ocone; Laleh Haghverdi; Nikola S. Müller; Fabian J. Theis (Bioinform., 2015)

destiny: diffusion maps for large-scale single-cell data in R. - Philipp Angerer; Laleh Haghverdi; Maren Büttner; Fabian J. Theis; Carsten Marr; Florian A. Büttner (Bioinform., 2016)

KDD Health Day/DSHealth 2021: Joint KDD 2021 Health Day and 2021 KDD Workshop on Applied Data Science for Healthcare: State of XAI and Trustworthiness in Health. - Fei Wang 001; Prithwish Chakraborty; Tao Xu; Pei-Yun Sabrina Hsueh; Xudong Sun 014; Gregor Stiglic; Gracy Crane; Jiang Bian 001; Laleh Haghverdi; Lixia Yao; Florian Buettner 001 (KDD, 2021)

Towards reliable quantification of cell state velocities. - Valérie Marot-Lassauzaie; Brigitte Joanne Bouman; Fearghal Declan Donaghy; Yasmin Demerdash; Marieke Alida Gertruda Essers; Laleh Haghverdi (PLoS Comput. Biol., 2022)

Adjustments to the reference dataset design improve cell type label transfer. - Carla Mölbert; Laleh Haghverdi (Frontiers Bioinform., 2023)

Single-cell multi-omics analysis identifies context-specific gene regulatory gates and mechanisms. - Seyed Amir Malekpour; Laleh Haghverdi; Mehdi Sadeghi (Briefings Bioinform., 2024)